RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 ZCCHC4Q9H5U6 513 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 METTL8Q9H825 291 aaKnown RBP16.35■□□□□ 0.21
CMTM3-211ENST00000565922 MTCH1Q9NZJ7 389 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 DIMT1Q9UNQ2 313 aaKnown RBP16.35■□□□□ 0.21
CMTM3-211ENST00000565922 DHDHQ9UQ10 334 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 IGKV1-9A0A0C4DH69 117 aa16.34■□□□□ 0.21
CMTM3-211ENST00000565922 TMEM89A2RUT3 159 aa16.34■□□□□ 0.21
CMTM3-211ENST00000565922 RNASE1P07998 156 aaKnown RBP16.34■□□□□ 0.21
CMTM3-211ENST00000565922 CHRM2P08172 466 aa16.34■□□□□ 0.21
CMTM3-211ENST00000565922 EEF1B2P24534 225 aaKnown RBP16.34■□□□□ 0.21
CMTM3-211ENST00000565922 POU3F4P49335 361 aa16.34■□□□□ 0.21
CMTM3-211ENST00000565922 RUSC1-AS1Q66K80 236 aa16.34■□□□□ 0.21
CMTM3-211ENST00000565922 RPL22L1Q6P5R6 122 aaKnown RBP16.34■□□□□ 0.21
CMTM3-211ENST00000565922 FAM185AQ8N0U4 392 aa16.34■□□□□ 0.21
CMTM3-211ENST00000565922 BATF2Q8N1L9 274 aa16.34■□□□□ 0.21
CMTM3-211ENST00000565922 OR10AC1Q8NH08 325 aa16.34■□□□□ 0.21
CMTM3-211ENST00000565922 EMG1Q92979 244 aaKnown RBP16.34■□□□□ 0.21
CMTM3-211ENST00000565922 TMEM80Q96HE8 168 aa16.34■□□□□ 0.21
CMTM3-211ENST00000565922 PDCD1LG2Q9BQ51 273 aa16.34■□□□□ 0.21
CMTM3-211ENST00000565922 hCG_1809904A0A1W2PP81 198 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 A0A1W2PPE2 198 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 A0A1W2PR64 198 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 A0A1W2PRV1 198 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 ALX3O95076 343 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 CD2P06729 351 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 COMPP49747 757 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-211ENST00000565922 ETV1P50549 477 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 DEFB112Q30KQ8 113 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 PARP16Q8N5Y8 322 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 OR5D13Q8NGL4 314 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 OR13C9Q8NGT0 318 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 UNKLQ9H9P5 680 aaKnown RBP16.33■□□□□ 0.2
CMTM3-211ENST00000565922 SEBOXQ9HB31 216 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-211ENST00000565922 ELL3Q9HB65 397 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-211ENST00000565922 RHOFQ9HBH0 211 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 SIRT7Q9NRC8 400 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 GLS2Q9UI32 602 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 STAB1Q9NY15 2570 aa16.33■□□□□ 0.2
CMTM3-211ENST00000565922 EFCAB10A6NFE3 127 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 E9PI62 339 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 SULT1B1O43704 296 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 TK1P04183 234 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 PIPP12273 146 aaPredicted RBP16.32■□□□□ 0.2
CMTM3-211ENST00000565922 CEBPDP49716 269 aaPredicted RBP16.32■□□□□ 0.2
CMTM3-211ENST00000565922 RPL31P62899 125 aaKnown RBP16.32■□□□□ 0.2
CMTM3-211ENST00000565922 SLC34A1Q06495 639 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 CDK5R1Q15078 307 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 SLC9A3R2Q15599 337 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 ASCC1Q8N9N2 400 aaKnown RBP16.32■□□□□ 0.2
CMTM3-211ENST00000565922 OR52N1Q8NH53 320 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 GPR148Q8TDV2 347 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 DUX5Q96PT3 197 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 CNOT2Q9NZN8 540 aaKnown RBP16.32■□□□□ 0.2
CMTM3-211ENST00000565922 PCDHGB5Q9Y5G0 923 aa16.32■□□□□ 0.2
CMTM3-211ENST00000565922 MDFIC2A0A1B0GVS7 189 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 K7N7A8 449 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 HCKP08631 526 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 COL10A1Q03692 680 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 PDZK1IP1Q13113 114 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 SPIN3Q5JUX0 258 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 Q6YL49 198 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 FAM58AQ8N1B3 248 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 TMEM86BQ8N661 226 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 Q8N7P7 452 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 C1orf147Q96MC9 270 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-211ENST00000565922 FAM96BQ9Y3D0 163 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 POMT1Q9Y6A1 747 aa16.31■□□□□ 0.2
CMTM3-211ENST00000565922 HAX1O00165 279 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 MAGEB3O15480 346 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 HOXA3O43365 443 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-211ENST00000565922 INMTO95050 263 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 HKR1P10072 659 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 GTF2A1P52655 376 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-211ENST00000565922 FOXL1Q12952 345 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 OR2G6Q5TZ20 316 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 GDPD3Q7L5L3 318 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 PDZD9Q8IXQ8 264 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 SAXO1Q8IYX7 474 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 PPP1R35Q8TAP8 253 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 RPS4Y2Q8TD47 263 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 SSMEM1Q8WWF3 244 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 SMIM19Q96E16 107 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 SNX22Q96L94 193 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 C19orf12Q9NSK7 152 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 PLCXD1Q9NUJ7 323 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 BABAM2Q9NXR7 383 aa16.3■□□□□ 0.2
CMTM3-211ENST00000565922 SOX21Q9Y651 276 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-211ENST00000565922 F8VVB4 439 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 F8VWA3 439 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 RNASEK-C17orf49H0YIS7 233 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 SPRY1O43609 319 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-211ENST00000565922 HAND1O96004 215 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 FBP1P09467 338 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 GNAO1P09471 354 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 RAB3AP20336 220 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 BCL3P20749 454 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 UBE2E1P51965 193 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 TAS2R43P59537 309 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 ACSM1Q08AH1 577 aa16.29■□□□□ 0.2
CMTM3-211ENST00000565922 ST3GAL4Q11206 333 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms