RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 SMIM4Q8WVI0 70 aa16.19■□□□□ 0.18
CSPG4P13-201ENST00000565545 Q96M66 194 aa16.19■□□□□ 0.18
CSPG4P13-201ENST00000565545 THAP7Q9BT49 309 aaPredicted RBP16.19■□□□□ 0.18
CSPG4P13-201ENST00000565545 A0A1W2PP11 408 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A10PA6NDY2 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A18PA6NE21 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A16PA6NEW6 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A20PA6NIJ5 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 ZSCAN5BA6NJL1 495 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A8PA6NJQ4 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A7PA6NKC0 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A22PA8MWA6 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A12PA8MX19 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A5PA8MXJ8 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A23PA8MXZ1 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 F5H5P2 479 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 ADH4P08319 380 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A15PP0C7V4 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A13PP0C7W8 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A14PP0C7W9 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM90A24PP0C7X0 464 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 TNFSF4P23510 183 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 LOXP28300 417 aaPredicted RBP16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 SRP9P49458 86 aaKnown RBP16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 ZNF81P51508 661 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 DEFA1P59665 94 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 DEFA3P59666 94 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 IFITM3Q01628 133 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 ZNF154Q13106 437 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 EFNB3Q15768 340 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 NHLRC3Q5JS37 347 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 TGIF2LYQ8IUE0 185 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 SNX29P2Q8IUI4 249 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 LYSMD2Q8IV50 215 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 C19orf18Q8NEA5 215 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 OR2Z1Q8NG97 314 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FCAMRQ8WWV6 532 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 SLAMF9Q96A28 289 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 FOXC2Q99958 501 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 DHRS9Q9BPW9 319 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 AUNIPQ9H7T9 357 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 SCPEP1Q9HB40 452 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 MTCH1Q9NZJ7 389 aa16.18■□□□□ 0.18
CSPG4P13-201ENST00000565545 PLCE1Q9P212 2302 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 A0A0A6YYD4 124 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM221AA4D161 298 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 SIAH2O43255 324 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 TPD52L2O43399 206 aaKnown RBP16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 SYNGR1O43759 233 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 NOS1APO75052 506 aaPredicted RBP16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 GRPP07492 148 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 SFTPBP07988 381 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 MELTFP08582 738 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 GSTP1P09211 210 aaKnown RBP16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 BCL3P20749 454 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 PRSS3P35030 304 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 FGF12P61328 243 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 SSBP1Q04837 148 aaKnown RBP16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 MAB21L1Q13394 359 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 MOGAT2Q3SYC2 334 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 STEAP3Q658P3 488 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 DNM1P46Q6ZS02 220 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 LINC00596Q86U02 117 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 CHST4Q8NCG5 386 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 SETD6Q8TBK2 473 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 RAB3CQ96E17 227 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 PIK3IP1Q96FE7 263 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 ELMOD3Q96FG2 381 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 GAL3ST1Q99999 423 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 NICN1Q9BSH3 213 aa16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.17■□□□□ 0.18
CSPG4P13-201ENST00000565545 ANKHD1Q8IWZ3 2542 aaKnown RBP16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 PRRC2AP48634 2157 aaKnown RBP16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 FOXI3A8MTJ6 420 aaPredicted RBP16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 B9A039 149 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 GOSR1O95249 250 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 NPBWR2P48146 333 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 INPP1P49441 399 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 PNLIPRP3Q17RR3 467 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 ZNF260Q3ZCT1 412 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 ZNF672Q499Z4 452 aaPredicted RBP16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 FBXL14Q8N1E6 418 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 NINJ1Q92982 152 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 YIPF5Q969M3 257 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 ERGIC1Q969X5 290 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 CISD1Q9NZ45 108 aaKnown RBP16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 IL19Q9UHD0 177 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 FBXO9Q9UK97 447 aaPredicted RBP16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 EDARQ9UNE0 448 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 ST3GAL6Q9Y274 331 aa16.16■□□□□ 0.18
CSPG4P13-201ENST00000565545 A0A1W2PQ09 198 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 M0R233 179 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 CDIPTO14735 213 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 CD55P08174 381 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 PGA5P0DJD9 388 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 BLVRBP30043 206 aaPredicted RBP16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 GATA4P43694 442 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 RBM11P57052 281 aaKnown RBP16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 DGCR2P98153 550 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 IL13RA2Q14627 380 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms