RNA–Protein interactions for RNA: ENST00000565167.1

RPAP1-208, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 1,712 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-208ENST00000565167 ADIPOQQ15848 244 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 PNLIPRP3Q17RR3 467 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 OLFML2AQ68BL7 652 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 ADAM5Q6NVV9 412 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 BATF2Q8N1L9 274 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 OR2Z1Q8NG97 314 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 GTF3AQ92664 365 aaKnown RBP12.12□□□□□ -0.47
RPAP1-208ENST00000565167 ZNF488Q96MN9 340 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 PECRQ9BY49 303 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 RHOFQ9HBH0 211 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 POU2F3Q9UKI9 436 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 POLDIP2Q9Y2S7 368 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 CACNG2Q9Y698 323 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 ADGRG4Q8IZF6 3080 aa12.12□□□□□ -0.47
RPAP1-208ENST00000565167 ZNF462Q96JM2 2506 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 IGHV3-64DA0A0J9YX35 117 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 MEIS3P1A6NDR6 274 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 ZSCAN5BA6NJL1 495 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 OR4A8P0C604 315 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 AP3S2P59780 193 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 BEX5Q5H9J7 111 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 NHLRC3Q5JS37 347 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 CCBE1Q6UXH8 406 aaPredicted RBP12.11□□□□□ -0.47
RPAP1-208ENST00000565167 DMRTC2Q8IXT2 367 aaPredicted RBP12.11□□□□□ -0.47
RPAP1-208ENST00000565167 C7orf50Q9BRJ6 194 aaKnown RBP12.11□□□□□ -0.47
RPAP1-208ENST00000565167 TLNRD1Q9H1K6 362 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
RPAP1-208ENST00000565167 PLEKHJ1Q9NW61 149 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 TAS2R8Q9NYW2 309 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 RALYQ9UKM9 306 aaKnown RBP12.11□□□□□ -0.47
RPAP1-208ENST00000565167 HSF4Q9ULV5 492 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A10PA6NDY2 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A18PA6NE21 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A16PA6NEW6 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A20PA6NIJ5 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A8PA6NJQ4 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A7PA6NKC0 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 CENPXA8MT69 81 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A22PA8MWA6 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A12PA8MX19 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A5PA8MXJ8 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A23PA8MXZ1 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 SSX5O60225 188 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A15PP0C7V4 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A13PP0C7W8 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A14PP0C7W9 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM90A24PP0C7X0 464 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 CD200P41217 278 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 KIR2DL3P43628 341 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 ERVK11-1P61568 191 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 DAZAP2Q15038 168 aaPredicted RBP12.11□□□□□ -0.47
RPAP1-208ENST00000565167 MPPED2Q15777 294 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 C6orf201Q7Z4U5 140 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 FAM58AQ8N1B3 248 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 NUDCD2Q8WVJ2 157 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 ST8SIA4Q92187 359 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 CYYR1Q96J86 154 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 NEDD4LQ96PU5 975 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 PLK3Q9H4B4 646 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 ZNF581Q9P0T4 197 aa12.11□□□□□ -0.47
RPAP1-208ENST00000565167 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
RPAP1-208ENST00000565167 SERPINE3A8MV23 424 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 E7EQL1 145 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 SIAH2O43255 324 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 NOS1APO75052 506 aaPredicted RBP12.1□□□□□ -0.47
RPAP1-208ENST00000565167 CA11O75493 328 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 PTBP3O95758 552 aaKnown RBP12.1□□□□□ -0.47
RPAP1-208ENST00000565167 CSF1P09603 554 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 PGA5P0DJD9 388 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 PRKACAP17612 351 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 CHATP28329 748 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 ZNF81P51508 661 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 GNG2P59768 71 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 ACTBP60709 375 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 ACTG1P63261 375 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 NKPD1Q17RQ9 610 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 PCGF3Q3KNV8 242 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 PRAMEF6Q5VXH4 476 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 TRAPPC6BQ86SZ2 158 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 Q8IYB0 196 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 DUSP18Q8NEJ0 188 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 ELMOD3Q96FG2 381 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 NRIP2Q9BQI9 281 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 FAAP24Q9BTP7 215 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 HRASLSQ9HDD0 168 aa12.1□□□□□ -0.47
RPAP1-208ENST00000565167 FAM240BA0A1B0GVZ2 78 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 FUT3P21217 361 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 SERPINF1P36955 418 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 ARFRP1Q13795 201 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 PDCD1Q15116 288 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 NKAPLQ5M9Q1 402 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 ZNF826PQ6ZT77 177 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 CELF2-AS1Q8N7Q2 184 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 DEDD2Q8WXF8 326 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 NEUROG1Q92886 237 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 EMG1Q92979 244 aaKnown RBP12.09□□□□□ -0.47
RPAP1-208ENST00000565167 UFSP2Q9NUQ7 469 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 IL36RNQ9UBH0 155 aa12.09□□□□□ -0.47
RPAP1-208ENST00000565167 ZNF107Q9UII5 783 aaPredicted RBP12.09□□□□□ -0.47
RPAP1-208ENST00000565167 ZDHHC8Q9ULC8 765 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms