RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 BLVRBP30043 206 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 S100A11P31949 105 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 RBP2P50120 134 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 MTCP1P56278 107 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 TAS2R46P59540 309 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 IL13RA1P78552 427 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 ARFRP1Q13795 201 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 SNTB1Q13884 538 aaKnown RBP6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 RNPS1Q15287 305 aaKnown RBP6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 TRIP6Q15654 476 aaKnown RBP6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 NKPD1Q17RQ9 610 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 C2orf68Q2NKX9 166 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 CLLU1Q5K131 121 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 TSPO2Q5TGU0 170 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 OR52W1Q6IF63 320 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM65Q6PI78 240 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 C1QL2Q7Z5L3 287 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 SKA3Q8IX90 412 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM116Q8NCL8 245 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM185AQ8NFB2 350 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 OR5M8Q8NGP6 311 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 PHB2Q99623 299 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 C1QTNF5Q9BXJ0 243 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 ZDHHC8Q9ULC8 765 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 A0A1W2PP11 408 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 C9orf170A2RU37 121 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 NME2P1O60361 137 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 DUS4LO95620 317 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 F10P00742 488 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 NRASP01111 189 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 CSN2P05814 226 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF35P13682 527 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 RPA2P15927 270 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 CXCL2P19875 107 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 AGAP20933 346 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 ACKR3P25106 362 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 SSTR2P30874 369 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 MAGEA5P43359 124 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 FUT6P51993 359 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 RRADP55042 308 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 RAB14P61106 215 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 PLGLB1Q02325 96 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 EXOSC2Q13868 293 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC10A1Q14973 349 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 OR8B8Q15620 311 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 ESCO2Q56NI9 601 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM128Q5BJH2 165 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 LY6G6FQ5SQ64 297 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 C6orf183Q5T699 404 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 COLCA1Q6ZS62 124 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 FAM214BQ7L5A3 538 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM251Q8N6I4 163 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 ZFP62Q8NB50 900 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 MDS2Q8NDY4 140 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 PXT1Q8NFP0 134 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 AKR7LQ8NHP1 331 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 MRGPRFQ96AM1 343 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 ELMOD3Q96FG2 381 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 BORCS8Q96FH0 119 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 PECRQ9BY49 303 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 UNKLQ9H9P5 680 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 KCNN3Q9UGI6 736 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 IL17BQ9UHF5 180 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 GPR132Q9UNW8 380 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC7A11Q9UPY5 501 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 NOP16Q9Y3C1 178 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 AUP1Q9Y679 476 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 SESN1Q9Y6P5 492 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 GPR179Q6PRD1 2367 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 A0A0B4J2A0 478 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 LOC102723971A0A1B0GUV8 181 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 hCG_38984A0A1B0GV85 526 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 OR2AT4A6NND4 320 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF587BE7ETH6 402 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 SIX6O95475 246 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 PTBP3O95758 552 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 PMP2P02689 132 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM225BP0DP42 221 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 PPP3CBP16298 524 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 SERPINA2P20848 420 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 CALCRP30988 508 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 OR3A3P47888 321 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 OR3A2P47893 321 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 ATP1B3P54709 279 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 FAM3BP58499 235 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 FAM3AP98173 230 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 HGFACQ04756 655 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 SURF2Q15527 256 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 MICBQ29980 383 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 DCAF12L2Q5VW00 463 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC25A24Q6NUK1 477 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 PLXDC2Q6UX71 529 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 C3P1Q6ZMU1 363 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 LINC00696Q6ZRV3 163 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 DPPA2Q7Z7J5 298 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 PIP4P1Q86T03 277 aa6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 PEG10Q86TG7 708 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-209ENST00000564678 LHFPL1Q86WI0 220 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms