RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 SP6Q3SY56 376 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 SPSB1Q96BD6 273 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 RALYQ9UKM9 306 aaKnown RBP10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 VSIG4Q9Y279 399 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 LANCL1O43813 399 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 HOXD4P09016 255 aaPredicted RBP10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 SULT1A3P0DMM9 295 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 SULT1A4P0DMN0 295 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 ZNF17P17021 662 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 WNT3P56703 355 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 SOHLH1Q5JUK2 328 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 NANOGP1Q8N7R0 232 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 FDCSPQ8NFU4 85 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 RTN4IP1Q8WWV3 396 aaPredicted RBP10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 INO80CQ6PI98 192 aaPredicted RBP10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 IL22RA2Q969J5 263 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 ALG14Q96F25 216 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 OR2J1Q9GZK6 312 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 USP54Q70EL1 1684 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 TCRBP04435 133 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 NAA50Q9GZZ1 169 aaKnown RBP10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 GABARAPL1Q9H0R8 117 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 ASCL3Q9NQ33 180 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 CEPT1Q9Y6K0 416 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 PNPP00491 289 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 COX5AP20674 150 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 FCARP24071 287 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 AMTP48728 403 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 ZNF528Q3MIS6 628 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 BTNL8Q6UX41 500 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 C6orf201Q7Z4U5 140 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 CACNA1GO43497 2377 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 PPP3CBP16298 524 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 KIR2DS2P43631 304 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 KCNRGQ8N5I3 272 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 LHX4Q969G2 390 aa10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 LSM2Q9Y333 95 aaKnown RBP10.66□□□□□ -0.7
TUBGCP4-208ENST00000564079 A0A0B4J2E0 115 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 A0A1B0GX12 115 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 FABP7O15540 132 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 MGPP08493 103 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 MDH2P40926 338 aaKnown RBP10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 ERVFRD-1P60508 538 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 RPL31P62899 125 aaKnown RBP10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 SLC25A21Q9BQT8 299 aaPredicted RBP10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 ZNF436Q9C0F3 470 aaPredicted RBP10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 YIPF5Q969M3 257 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 TJP1Q07157 1748 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 ID1P41134 155 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 MAGEB1P43366 347 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 CCDC144NLQ6NUI1 221 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 H3F3CQ6NXT2 135 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 AHRRA9YTQ3 701 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 FAM3AP98173 230 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 GUCD1Q96NT3 240 aa10.65□□□□□ -0.7
TUBGCP4-208ENST00000564079 FAM106CPP0CH98 169 aa10.65□□□□□ -0.71
TUBGCP4-208ENST00000564079 RAE1P78406 368 aaKnown RBP10.65□□□□□ -0.71
TUBGCP4-208ENST00000564079 MESP2Q0VG99 397 aa10.65□□□□□ -0.71
TUBGCP4-208ENST00000564079 PCOLCEQ15113 449 aa10.65□□□□□ -0.71
TUBGCP4-208ENST00000564079 OR10A7Q8NGE5 316 aa10.65□□□□□ -0.71
TUBGCP4-208ENST00000564079 FCRL1Q96LA6 429 aa10.65□□□□□ -0.71
TUBGCP4-208ENST00000564079 SIRT7Q9NRC8 400 aa10.65□□□□□ -0.71
TUBGCP4-208ENST00000564079 CES1P1Q9UKY3 287 aa10.65□□□□□ -0.71
TUBGCP4-208ENST00000564079 MOSPD3O75425 235 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 SNAPINO95295 136 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 ZNF26P17031 533 aaPredicted RBP10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 CLDN20P56880 219 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 OR2M3Q8NG83 312 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 ASB10Q8WXI3 467 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 SMIM19Q96E16 107 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 CTDSP1Q9GZU7 261 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 SHANK3Q9BYB0 1731 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 TRAV39A0A0B4J263 110 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 RFPL4AA6NLU0 287 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 RFPL4AL1F8VTS6 287 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 CST7O76096 145 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 KCNJ3P48549 501 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 FAM214BQ7L5A3 538 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 ARHGAP5-AS1Q96IT6 56 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 RNF167Q9H6Y7 350 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 RANGRFQ9HD47 186 aaPredicted RBP10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 GUCA2AQ02747 115 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 ZNF273Q14593 569 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 ZBTB37Q5TC79 503 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 DOLPP1Q86YN1 238 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 OR4A4PQ8NGN8 299 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 RHOXF1Q8NHV9 184 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 NRG4Q8WWG1 115 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 ZNF501Q96CX3 271 aaPredicted RBP10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 MOGAT1Q96PD6 335 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 MS4A10Q96PG2 267 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 NDUFB11Q9NX14 153 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 FLRT3Q9NZU0 649 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 SPAG17Q6Q759 2223 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 NUP205Q92621 2012 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 OR5B21A6NL26 309 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 AQP8O94778 261 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 CD40P25942 277 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 DGCR2P98153 550 aa10.64□□□□□ -0.71
TUBGCP4-208ENST00000564079 CDK5R1Q15078 307 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms