RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 ZC3H12DA2A288 527 aaKnown RBP5.59□□□□□ -1.51
CLK3-212ENST00000563418 NKX6-3A6NJ46 265 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 P2RY10O00398 339 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 BTCP35070 178 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 CLEC12BQ2HXU8 276 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 IER5LQ5T953 404 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 SLC36A1Q7Z2H8 476 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 C6orf201Q7Z4U5 140 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 GBGT1Q8N5D6 347 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 OR2V1Q8NHB1 315 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 TPPP3Q9BW30 176 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 SLC45A2Q9UMX9 530 aa5.59□□□□□ -1.51
CLK3-212ENST00000563418 FBLP22087 321 aaKnown RBP5.59□□□□□ -1.52
CLK3-212ENST00000563418 CTU1Q7Z7A3 348 aaKnown RBP5.59□□□□□ -1.52
CLK3-212ENST00000563418 WDFY1Q8IWB7 410 aa5.59□□□□□ -1.52
CLK3-212ENST00000563418 MESP1Q9BRJ9 268 aa5.59□□□□□ -1.52
CLK3-212ENST00000563418 PRTFDC1Q9NRG1 225 aa5.59□□□□□ -1.52
CLK3-212ENST00000563418 PRSS21Q9Y6M0 314 aa5.59□□□□□ -1.52
CLK3-212ENST00000563418 RICTORQ6R327 1708 aa5.59□□□□□ -1.52
CLK3-212ENST00000563418 PRSS47A8MTI9 375 aa5.59□□□□□ -1.52
CLK3-212ENST00000563418 PLAC9Q5JTB6 97 aa5.59□□□□□ -1.52
CLK3-212ENST00000563418 OR4D9Q8NGE8 314 aa5.59□□□□□ -1.52
CLK3-212ENST00000563418 DIO2Q92813 273 aa5.59□□□□□ -1.52
CLK3-212ENST00000563418 ALG14Q96F25 216 aa5.59□□□□□ -1.52
CLK3-212ENST00000563418 ZNF385AQ96PM9 386 aaKnown RBP5.59□□□□□ -1.52
CLK3-212ENST00000563418 SF3B6Q9Y3B4 125 aaKnown RBP5.59□□□□□ -1.52
CLK3-212ENST00000563418 RNF222A6NCQ9 220 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 S1PR2O95136 353 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 MAS1LP35410 378 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 DCAF7P61962 342 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 EWSR1Q01844 656 aaKnown RBP eCLIP5.58□□□□□ -1.52
CLK3-212ENST00000563418 ZNF770Q6IQ21 691 aaPredicted RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 PSRC1Q6PGN9 363 aaPredicted RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 CDC20BQ86Y33 519 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 TEX29Q8N6K0 151 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 RNF133Q8WVZ7 376 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 DAZLQ92904 295 aaKnown RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 LY75O60449 1722 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 SMIM13P0DJ93 91 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 SLC25A6P12236 298 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 EPHA8P29322 1005 aaPredicted RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 OR1D2P34982 312 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 WDR25Q64LD2 544 aaPredicted RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 CPT1CQ8TCG5 803 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 MSL2Q9HCI7 577 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 MRPS16Q9Y3D3 137 aaKnown RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 A0A1B0GTI1 187 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 A0A1B0GTL3 188 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 GFYI3L273 518 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 WNT10BO00744 389 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 CT45A6P0DMU7 189 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 CT45A5P0DMU8 189 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 CT45A7P0DMV0 189 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 SEMG2Q02383 582 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 CT45A1Q5HYN5 189 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 CT45A3Q8NHU0 189 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 OTOSQ8NHW6 89 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 WNT2BQ93097 391 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 TMEM147Q9BVK8 224 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 KCNK15Q9H427 330 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 PLAGL1Q9UM63 463 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 TAF1LQ8IZX4 1826 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 TP53BP1Q12888 1972 aaPredicted RBP5.58□□□□□ -1.52
CLK3-212ENST00000563418 ZNF816-ZNF321PA0A0X1KG74 233 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 HLA-DRB1P01911 266 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 CT45A10P0DMU9 189 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 PLP2Q04941 152 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 SLC38A11Q08AI6 406 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 OR6C1Q96RD1 312 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 ATP6V0BQ99437 205 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 NRSN2Q9GZP1 204 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 TUBD1Q9UJT1 453 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 FZD1Q9UP38 647 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 ABCA3Q99758 1704 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 H0YL77 283 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 RND3P61587 244 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 APCDD1LQ8NCL9 501 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 FGF14Q92915 247 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 CYSLTR1Q9Y271 337 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 ZNF835Q9Y2P0 537 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 IL2RAP01589 272 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 EDN1P05305 212 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 ATP6V0CP27449 155 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 MPLP40238 635 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 DYNLT3P51808 116 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 GGTLC2Q14390 218 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 TMEM249Q2WGJ8 235 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 MKXQ8IYA7 352 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 MORN4Q8NDC4 146 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 OR10G9Q8NGN4 311 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 OR10G7Q8NGN6 311 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 OR2D2Q9H210 308 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 ST20Q9HBF5 79 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 SIGLEC7Q9Y286 467 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 ANKRD36A6QL64 1941 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 KBTBD11O94819 623 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 CNIH1O95406 144 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 AMBPP02760 352 aa5.58□□□□□ -1.52
CLK3-212ENST00000563418 AMY1AP04745 511 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms