RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 RRAS2P62070 204 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-208ENST00000563220 ADORA2A-AS1P86434 159 aa15.37■□□□□ 0.05
COMMD4-208ENST00000563220 OR8G1Q15617 311 aa15.37■□□□□ 0.05
COMMD4-208ENST00000563220 NKAPLQ5M9Q1 402 aa15.37■□□□□ 0.05
COMMD4-208ENST00000563220 SLC7A5P1Q8MH63 180 aa15.37■□□□□ 0.05
COMMD4-208ENST00000563220 ZNF488Q96MN9 340 aa15.37■□□□□ 0.05
COMMD4-208ENST00000563220 PKIBQ9C010 78 aa15.37■□□□□ 0.05
COMMD4-208ENST00000563220 NUDT15Q9NV35 164 aa15.37■□□□□ 0.05
COMMD4-208ENST00000563220 PLEKHJ1Q9NW61 149 aa15.37■□□□□ 0.05
COMMD4-208ENST00000563220 NOP16Q9Y3C1 178 aaKnown RBP15.37■□□□□ 0.05
COMMD4-208ENST00000563220 SPEF1Q9Y4P9 236 aa15.37■□□□□ 0.05
COMMD4-208ENST00000563220 NUBP2Q9Y5Y2 271 aa15.37■□□□□ 0.05
COMMD4-208ENST00000563220 CADP27708 2225 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 IGHV3-64DA0A0J9YX35 117 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 TRAPPC2LH3BP13 241 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 CYB5AP00167 134 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 ZNF250P15622 560 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 CD83Q01151 205 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 IL24Q13007 206 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 OR52W1Q6IF63 320 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 OR10AD1Q8NGE0 317 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 OR56B4Q8NH76 319 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 WFIKKN1Q96NZ8 548 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 MSL2Q9HCI7 577 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 COPZ2Q9P299 210 aa15.36■□□□□ 0.05
COMMD4-208ENST00000563220 ZNF107Q9UII5 783 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-208ENST00000563220 HEATR1Q9H583 2144 aaKnown RBP15.36■□□□□ 0.05
COMMD4-208ENST00000563220 LRP5LA4QPB2 252 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 DPRXA6NFQ7 191 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 M0QYG6 137 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 C1QBP02746 253 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 CD74P04233 296 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 CHATP28329 748 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 FAUP35544 74 aaKnown RBP15.35■□□□□ 0.05
COMMD4-208ENST00000563220 FGF12P61328 243 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 ARFRP1Q13795 201 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 BRICD5Q6PL45 260 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 VHLLQ6RSH7 139 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 BTN2A1Q7KYR7 527 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 SCCPDHQ8NBX0 429 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 TMEM171Q8WVE6 324 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 FBXW5Q969U6 566 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 FAAP24Q9BTP7 215 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 TINAGL1Q9GZM7 467 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-208ENST00000563220 ING3Q9NXR8 418 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 IL36RNQ9UBH0 155 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 DUSP13Q9UII6 198 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 HSF4Q9ULV5 492 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 ANAPC10Q9UM13 185 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 FLVCR2Q9UPI3 526 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 SERPINE3A8MV23 424 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 ZNF736B4DX44 427 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-208ENST00000563220 J3QT63 122 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 RAB3DO95716 219 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 CHRNB4P30926 498 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 GZMKP49863 264 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 ASCL1P50553 236 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 ZNF154Q13106 437 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 OCSTAMPQ9BR26 566 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 TMEM246Q9BRR3 403 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 IFT46Q9NQC8 304 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 NKIRAS2Q9NYR9 191 aa15.35■□□□□ 0.05
COMMD4-208ENST00000563220 ACACBO00763 2458 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 FAM90A27PA6NNH2 459 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 F5H5P2 479 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 SNU13P55769 128 aaKnown RBP15.34■□□□□ 0.05
COMMD4-208ENST00000563220 MAB21L1Q13394 359 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 ARL6IP1Q15041 203 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 CDSNQ15517 529 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 TMEM108Q6UXF1 575 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 ZNF782Q6ZMW2 699 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-208ENST00000563220 OR51S1Q8NGJ8 323 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 ZFAND1Q8TCF1 268 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 SNAPC3Q92966 411 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 SULT4A1Q9BR01 284 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 NBASA2RRP1 2371 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 COL6A6A6NMZ7 2263 aa15.34■□□□□ 0.05
COMMD4-208ENST00000563220 A0A1B0GWJ7 208 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 C7orf66A4D0T2 115 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 CDIPTO14735 213 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 CA11O75493 328 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 IGHV3-13P01766 116 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 GRPP07492 148 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 ZNF735P0CB33 412 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 NAT1P18440 290 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 PTAFRP25105 342 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 SNTB1Q13884 538 aaKnown RBP15.33■□□□□ 0.05
COMMD4-208ENST00000563220 NHLRC3Q5JS37 347 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.05
COMMD4-208ENST00000563220 OR13G1Q8NGZ3 307 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 GTF3AQ92664 365 aaKnown RBP15.33■□□□□ 0.05
COMMD4-208ENST00000563220 EMG1Q92979 244 aaKnown RBP15.33■□□□□ 0.05
COMMD4-208ENST00000563220 POM121Q96HA1 1249 aa15.33■□□□□ 0.05
COMMD4-208ENST00000563220 HDHD3Q9BSH5 251 aaPredicted RBP15.33■□□□□ 0.05
COMMD4-208ENST00000563220 ZNF230Q9UIE0 474 aaPredicted RBP15.33■□□□□ 0.05
COMMD4-208ENST00000563220 NKX2-6A6NCS4 301 aa15.33■□□□□ 0.04
COMMD4-208ENST00000563220 H2AFB2P0C5Z0 115 aa15.33■□□□□ 0.04
COMMD4-208ENST00000563220 C11orf53Q8IXP5 236 aa15.33■□□□□ 0.04
COMMD4-208ENST00000563220 LILRB4Q8NHJ6 448 aa15.33■□□□□ 0.04
COMMD4-208ENST00000563220 SYT3Q9BQG1 590 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms