RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 SAXO1Q8IYX7 474 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 ZSCAN4Q8NAM6 433 aaPredicted RBP13.02□□□□□ -0.33
USB1-208ENST00000563207 POC1AQ8NBT0 407 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 NOX4Q9NPH5 578 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 TAS2R4Q9NYW5 299 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 MIOXQ9UGB7 285 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 INSIG2Q9Y5U4 225 aa13.02□□□□□ -0.33
USB1-208ENST00000563207 TRIM64CA6NLI5 447 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 TRIM77I1YAP6 450 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 AKR7A2O43488 359 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 RHBDL1O75783 438 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 WNT2P09544 360 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 EGR1P18146 543 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 GLRA1P23415 457 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 GATA3P23771 443 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 COMPP49747 757 aaPredicted RBP13.01□□□□□ -0.33
USB1-208ENST00000563207 UBA52P62987 128 aaKnown RBP13.01□□□□□ -0.33
USB1-208ENST00000563207 PAX2Q02962 417 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 PDZK1IP1Q13113 114 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 SSX1Q16384 188 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 TUSC1Q2TAM9 212 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 ASPHD2Q6ICH7 369 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 LYPD2Q6UXB3 125 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 ANGPTL5Q86XS5 388 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 NKAIN3Q8N8D7 197 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 TMIGD2Q96BF3 282 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 TMEM246Q9BRR3 403 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 SUCNR1Q9BXA5 334 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 DNTTIP1Q9H147 329 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 TCF7L1Q9HCS4 588 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 POLR3KQ9Y2Y1 108 aaPredicted RBP13.01□□□□□ -0.33
USB1-208ENST00000563207 AUP1Q9Y679 476 aa13.01□□□□□ -0.33
USB1-208ENST00000563207 PPIAL4CA0A0B4J2A2 164 aa13□□□□□ -0.33
USB1-208ENST00000563207 C3orf80F5H4A9 247 aa13□□□□□ -0.33
USB1-208ENST00000563207 PIN1P1O15428 100 aa13□□□□□ -0.33
USB1-208ENST00000563207 SYNGR1O43759 233 aa13□□□□□ -0.33
USB1-208ENST00000563207 INMTO95050 263 aa13□□□□□ -0.33
USB1-208ENST00000563207 UCHL1P09936 223 aa13□□□□□ -0.33
USB1-208ENST00000563207 IGHV4-38-2P0DP08 117 aa13□□□□□ -0.33
USB1-208ENST00000563207 SRMP19623 302 aa13□□□□□ -0.33
USB1-208ENST00000563207 RPS25P62851 125 aaKnown RBP13□□□□□ -0.33
USB1-208ENST00000563207 SMIM21Q3B7S5 101 aa13□□□□□ -0.33
USB1-208ENST00000563207 HSD17B12Q53GQ0 312 aa13□□□□□ -0.33
USB1-208ENST00000563207 CD200R1LQ6Q8B3 271 aa13□□□□□ -0.33
USB1-208ENST00000563207 TMEM91Q6ZNR0 172 aa13□□□□□ -0.33
USB1-208ENST00000563207 SLC25A26Q70HW3 274 aa13□□□□□ -0.33
USB1-208ENST00000563207 NLRC3Q7RTR2 1065 aa13□□□□□ -0.33
USB1-208ENST00000563207 C3orf56Q8N813 242 aa13□□□□□ -0.33
USB1-208ENST00000563207 BOLLQ8N9W6 283 aaKnown RBP13□□□□□ -0.33
USB1-208ENST00000563207 PNLDC1Q8NA58 520 aaKnown RBP13□□□□□ -0.33
USB1-208ENST00000563207 OR51A2Q8NGJ7 313 aa13□□□□□ -0.33
USB1-208ENST00000563207 TMEM203Q969S6 136 aa13□□□□□ -0.33
USB1-208ENST00000563207 MUL1Q969V5 352 aa13□□□□□ -0.33
USB1-208ENST00000563207 CEP19Q96LK0 163 aa13□□□□□ -0.33
USB1-208ENST00000563207 NRIP2Q9BQI9 281 aa13□□□□□ -0.33
USB1-208ENST00000563207 SLITRK2Q9H156 845 aa13□□□□□ -0.33
USB1-208ENST00000563207 KAAG1Q9UBP8 84 aa13□□□□□ -0.33
USB1-208ENST00000563207 DNAJB11Q9UBS4 358 aa13□□□□□ -0.33
USB1-208ENST00000563207 TRAV8-7A0A075B6U6 113 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 TRDV1A0A1B0GX56 115 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 A0A1W2PPK0 400 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 A8MXK9 166 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.99□□□□□ -0.33
USB1-208ENST00000563207 GABRPO00591 440 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 TNFRSF13BO14836 293 aaPredicted RBP12.99□□□□□ -0.33
USB1-208ENST00000563207 JUNBP17275 347 aaPredicted RBP12.99□□□□□ -0.33
USB1-208ENST00000563207 ZNF93P35789 620 aaPredicted RBP12.99□□□□□ -0.33
USB1-208ENST00000563207 BMXP51813 675 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 ERVK11-1P61568 191 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 PAX8Q06710 450 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 SCGB2A2Q13296 93 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 NEDD8Q15843 81 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 AWAT1Q58HT5 328 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 ATPAF1Q5TC12 328 aaPredicted RBP12.99□□□□□ -0.33
USB1-208ENST00000563207 DDI2Q5TDH0 399 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 SFRP4Q6FHJ7 346 aaPredicted RBP12.99□□□□□ -0.33
USB1-208ENST00000563207 ACP7Q6ZNF0 438 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 PXT1Q8NFP0 134 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 OR52N4Q8NGI2 321 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 FOXRED1Q96CU9 486 aaPredicted RBP12.99□□□□□ -0.33
USB1-208ENST00000563207 NEIL1Q96FI4 390 aaPredicted RBP12.99□□□□□ -0.33
USB1-208ENST00000563207 GPER1Q99527 375 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 HES4Q9HCC6 221 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 MTCH1Q9NZJ7 389 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 NLKQ9UBE8 527 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 NUP50Q9UKX7 468 aa12.99□□□□□ -0.33
USB1-208ENST00000563207 MDFIC2A0A1B0GVS7 189 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 DNAJC9-AS1A6NH13 148 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 NXPH2O95156 264 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 RPS2P15880 293 aaKnown RBP12.98□□□□□ -0.33
USB1-208ENST00000563207 RANBP1P43487 201 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 POU3F4P49335 361 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 NPY4RP50391 375 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 ZP1P60852 638 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 FABP5Q01469 135 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 C11orf91Q3C1V1 193 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 ESCO2Q56NI9 601 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 CRIP3Q6Q6R5 217 aa12.98□□□□□ -0.33
USB1-208ENST00000563207 FIP1L1Q6UN15 594 aaKnown RBP12.98□□□□□ -0.33
USB1-208ENST00000563207 SLC36A1Q7Z2H8 476 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms