RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TMEM156Q8N614 296 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 LIME1Q9H400 295 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 TMEM38BQ9NVV0 291 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 LUZP4Q9P127 313 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 CACFD1Q9UGQ2 172 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 SLC7A11Q9UPY5 501 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 PTRH2Q9Y3E5 179 aaKnown RBP11.37□□□□□ -0.59
USB1-207ENST00000563149 TMED3Q9Y3Q3 217 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 NCOA6Q14686 2063 aaPredicted RBP11.37□□□□□ -0.59
USB1-207ENST00000563149 COLCA2A8K830 154 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 ANGPTL7O43827 346 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 SCGB1D2O95969 90 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 GLAP06280 429 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 CELA2AP08217 269 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 SPP1P10451 314 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 NFYBP25208 207 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 GLP1RP43220 463 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 RRADP55042 308 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 PCBD1P61457 104 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 RNF212Q495C1 297 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 AGBL5Q8NDL9 886 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 TOMM40LQ969M1 308 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 MOB3AQ96BX8 217 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 SGCZQ96LD1 299 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 RSRP1Q9BUV0 290 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 SRXN1Q9BYN0 137 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 TUBA4BQ9H853 241 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 PLSCR2Q9NRY7 297 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 ST8SIA3O43173 380 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 PDCD6O75340 191 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 IGHEP01854 428 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 OPRM1P35372 400 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 RAB5BP61020 215 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 SRPXP78539 464 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 MALLQ13021 153 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 RIPPLY2Q5TAB7 128 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 ZNF774Q6NX45 483 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 SLC22A25Q6T423 547 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 FAM185AQ8N0U4 392 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 OR10AD1Q8NGE0 317 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 OR2AE1Q8NHA4 323 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 MR1Q95460 341 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 ERGIC1Q969X5 290 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 MSI2Q96DH6 328 aaKnown RBP11.36□□□□□ -0.59
USB1-207ENST00000563149 ZNF837Q96EG3 531 aaPredicted RBP11.36□□□□□ -0.59
USB1-207ENST00000563149 JSRP1Q96MG2 331 aaPredicted RBP11.36□□□□□ -0.59
USB1-207ENST00000563149 SLC2A9Q9NRM0 540 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 BRWD1Q9NSI6 2320 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 COA4Q9NYJ1 87 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 HS3ST3B1Q9Y662 390 aa11.36□□□□□ -0.59
USB1-207ENST00000563149 FAM90A10PA6NDY2 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A18PA6NE21 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A16PA6NEW6 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A20PA6NIJ5 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A8PA6NJQ4 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A7PA6NKC0 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A22PA8MWA6 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A12PA8MX19 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A5PA8MXJ8 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A23PA8MXZ1 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 XRCC2O43543 280 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 KLF7O75840 302 aaPredicted RBP11.35□□□□□ -0.59
USB1-207ENST00000563149 OR8U9P0C7N5 309 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A15PP0C7V4 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A13PP0C7W8 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A14PP0C7W9 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 FAM90A24PP0C7X0 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 ZNF32P17041 273 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 TCN2P20062 427 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 RPL35P42766 123 aaKnown RBP11.35□□□□□ -0.59
USB1-207ENST00000563149 AKR1D1P51857 326 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 B3GALT5-AS1P59052 145 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 S100A12P80511 92 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 SRSF7Q16629 238 aaKnown RBP eCLIP11.35□□□□□ -0.59
USB1-207ENST00000563149 FBXW12Q6X9E4 464 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 LYZL2Q7Z4W2 148 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 OR2Y1Q8NGV0 311 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 OR8U1Q8NH10 309 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 IFI44Q8TCB0 444 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 SMIM3Q9BZL3 60 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 A0A0C4DFX4 3053 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 KIAA1549Q9HCM3 1950 aa11.35□□□□□ -0.59
USB1-207ENST00000563149 EML6Q6ZMW3 1958 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 CCDC187A0A096LP49 1063 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 NSG1A0A0A6YYJ2 146 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 hCG_38984A0A1B0GV85 526 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 A0A1B0GW64 132 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 ZNF716A6NP11 495 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 C9JQL5 133 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 PRSS44E7EML9 344 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 GEMIN2O14893 280 aaKnown RBP11.34□□□□□ -0.59
USB1-207ENST00000563149 AGPAT2O15120 278 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 HOXB1P14653 301 aaPredicted RBP11.34□□□□□ -0.59
USB1-207ENST00000563149 HTR5AP47898 357 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 CARD18P57730 90 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 HERV-K104P61576 105 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 HGFACQ04756 655 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 GUK1Q16774 197 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 HLA-BQ31612 363 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 SP6Q3SY56 376 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms