RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 TTC23Q5W5X9 447 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 TMEM154Q6P9G4 183 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 DEGS2Q6QHC5 323 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 LRRN1Q6UXK5 716 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 FBXW12Q6X9E4 464 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 Q6ZR03 302 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 Q6ZSR3 168 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 TRPT1Q86TN4 253 aaKnown RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 SLC35F2Q8IXU6 374 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 LRRC75A-AS1Q8N1F1 130 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 MUC15Q8N387 334 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 DHRSXQ8N5I4 330 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 OR51G2Q8NGK0 314 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 OR1J2Q8NGS2 313 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 OR1J1Q8NGS3 322 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 OR2AJ1Q8NGZ0 328 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 KLF14Q8TD94 323 aaPredicted RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 CYGBQ8WWM9 190 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 TMEM190Q8WZ59 177 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 GTF3AQ92664 365 aaKnown RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 SGK3Q96BR1 496 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 RNF125Q96EQ8 232 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 ZNF799Q96GE5 643 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 PLEKHA8Q96JA3 519 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 OR8B4Q96RC9 309 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 CNN2Q99439 309 aaKnown RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 ANKRD60Q9BZ19 345 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 BCL2L14Q9BZR8 327 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 OR2J1Q9GZK6 312 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 CDH20Q9HBT6 801 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 AMBNQ9NP70 447 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 FGF20Q9NP95 211 aaPredicted RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 PLCXD1Q9NUJ7 323 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 PAK1IP1Q9NWT1 392 aaPredicted RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 CLN6Q9NWW5 311 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 FAM206AQ9NX38 181 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 MRM2Q9UI43 246 aaKnown RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 PLEKHA6Q9Y2H5 1048 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 ORC6Q9Y5N6 252 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 SMAD5-AS1Q9Y6J3 95 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 HSPE1-MOB4S4R3N1 261 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 ROS1P08922 2347 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 A0A096LNT2 108 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 A0A1B0GTI1 187 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 ZSCAN5BA6NJL1 495 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 F5H5K5 113 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 H0YHG0 523 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 H3BSA7 217 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 ZNF254O75437 659 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 TTRP02766 147 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 OR2T7P0C7T2 308 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 SLC2A1P11166 492 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 GNB3P16520 340 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 CCNOP22674 350 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 TUBG1P23258 451 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 GUCA1AP43080 201 aaPredicted RBP3.78□□□□□ -1.8
SMG1-206ENST00000562668 RAD52P43351 418 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 RGS6P49758 472 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 PPOXP50336 477 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 PRKXP51817 358 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 ZNF121P58317 390 aaPredicted RBP3.78□□□□□ -1.8
SMG1-206ENST00000562668 CXCR4P61073 352 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 PPP1CBP62140 327 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 GRB2P62993 217 aaKnown RBP3.78□□□□□ -1.8
SMG1-206ENST00000562668 IL5RAQ01344 420 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 ZNF92Q03936 586 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 RAB40BQ12829 278 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 GK2Q14410 553 aaPredicted RBP3.78□□□□□ -1.8
SMG1-206ENST00000562668 CDONQ4KMG0 1287 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 GLYATL3Q5SZD4 288 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 SPATA46Q5T0L3 261 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 AGAP6Q5VW22 663 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 FAM53AQ6NSI3 398 aaPredicted RBP3.78□□□□□ -1.8
SMG1-206ENST00000562668 ZNF322Q6U7Q0 402 aaPredicted RBP3.78□□□□□ -1.8
SMG1-206ENST00000562668 DRAM2Q6UX65 266 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 IZUMO2Q6UXV1 221 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 RBMS3Q6XE24 437 aaKnown RBP3.78□□□□□ -1.8
SMG1-206ENST00000562668 PLEKHG7Q6ZR37 379 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 C1orf174Q8IYL3 243 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 ZNF679Q8IYX0 411 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 ZCCHC24Q8N2G6 241 aaKnown RBP3.78□□□□□ -1.8
SMG1-206ENST00000562668 PRSS35Q8N3Z0 413 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 ZNF555Q8NEP9 628 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 OR52I1Q8NGK6 324 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 OR2T27Q8NH04 317 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 OR2AE1Q8NHA4 323 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 RPS4Y2Q8TD47 263 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 FCAMRQ8WWV6 532 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 SGCDQ92629 289 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 RORBQ92753 470 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 GGHQ92820 318 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 APOBEC3DQ96AK3 386 aaPredicted RBP3.78□□□□□ -1.8
SMG1-206ENST00000562668 HAVCR1Q96D42 359 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 CCL19Q99731 98 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 FOXC2Q99958 501 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 APOL4Q9BPW4 351 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 PCGF1Q9BSM1 259 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 CACNG6Q9BXT2 260 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 TEX12Q9BXU0 123 aa3.78□□□□□ -1.8
SMG1-206ENST00000562668 TTTY10Q9BZA0 68 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms