RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 C1orf194Q5T5A4 169 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 SLC35E3Q7Z769 313 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 LRP11Q86VZ4 500 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 MRPL41Q8IXM3 137 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 CADM4Q8NFZ8 388 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 OR13C3Q8NGS6 347 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 MRGPRX4Q96LA9 322 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 HIST1H2AAQ96QV6 131 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 OR8B4Q96RC9 309 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 LMF2Q9BU23 707 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 ZNF700Q9H0M5 742 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 CDH20Q9HBT6 801 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 PCNX3Q9H6A9 2034 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 CLDN34H7C241 214 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 SDCBPO00560 298 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 LMX1BO60663 402 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 CSTAP01040 98 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 MBPP02686 304 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 FSTP19883 344 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 RPS4XP62701 263 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 OR5I1Q13606 314 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 PMS2P11Q13670 270 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 FDX2Q6P4F2 183 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 OTOSQ8NHW6 89 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 RNASE8Q8TDE3 154 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 C22orf15Q8WYQ4 148 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 SCGB3A2Q96PL1 93 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 CHST11Q9NPF2 352 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 GPR173Q9NS66 373 aa12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-203ENST00000562609 IGHV1OR21-1A0A087WYE8 117 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 SCGB1D1O95968 90 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 RBMXP38159 391 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 BATFQ16520 125 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 VAX1Q5SQQ9 334 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 CBLN3Q6UW01 205 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 C17orf82Q86X59 251 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 C17orf78Q8N4C9 275 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 OR13G1Q8NGZ3 307 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 OR1L3Q8NH93 324 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 PTPMT1Q8WUK0 201 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 CYYR1Q96J86 154 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 CABLES2Q9BTV7 478 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 SRPK3Q9UPE1 567 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 CNTRLQ7Z7A1 2325 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 FIGNL2A6NMB9 653 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 XRCC2O43543 280 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 SCGNO76038 276 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 AHSA1O95433 338 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 ICAM4Q14773 271 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 P2RY6Q15077 328 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 TMEM176BQ3YBM2 270 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 ALG10Q5BKT4 473 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 C1QL3Q5VWW1 255 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 FBXW9Q5XUX1 488 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 SPSB3Q6PJ21 355 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 ZFP62Q8NB50 900 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 ZNF524Q96C55 264 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 GPX7Q96SL4 187 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 NUDT22Q9BRQ3 303 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 NICN1Q9BSH3 213 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 C1orf123Q9NWV4 160 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 GRHPRQ9UBQ7 328 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 VAX2Q9UIW0 290 aa12.3□□□□□ -0.44
GTF3C1-203ENST00000562609 GRK6P43250 576 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 ALDH3B1P43353 468 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 ASCL1P50553 236 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 RND2P52198 227 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 CD226Q15762 336 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 SLC16A14Q7RTX9 510 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 OR10A7Q8NGE5 316 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 OR5H2Q8NGV7 314 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 NXF5Q9H1B4 397 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 TCFL5Q9UL49 500 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 HSPB2A8KAH6 182 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 E5RGE8 158 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 CLPSP04118 112 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 VSIG8P0DPA2 414 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 CD82P27701 267 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 BRS3P32247 399 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 IGLV3-21P80748 117 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 TLE4Q04727 773 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 ZP2Q05996 745 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 FUT7Q11130 342 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 HSPB2Q16082 182 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 COX15Q7KZN9 410 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 MARCH3Q86UD3 253 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 SPEM1Q8N4L4 309 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 HOXB13Q92826 284 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 PARD6AQ9NPB6 346 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 TUBD1Q9UJT1 453 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 POLR3KQ9Y2Y1 108 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 NSG2Q9Y328 171 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 TRBV24-1A0A075B6N3 115 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 KIR2DL5BA0A0G2JN68 375 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 KIR2DL5BA0A0G2JPC4 375 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 IFNL4K9M1U5 179 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 PTGER4P35408 488 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 ELLP55199 621 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 RAC1P63000 192 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms