RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 C7orf69Q9H7B7 122 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 OPN4Q9UHM6 478 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 ZFHX3Q15911 3703 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 KIR2DS1A0A191URI9 304 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 RFPL4AA6NLU0 287 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 RFPL4AL1F8VTS6 287 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 F8VVB4 439 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 F8VWA3 439 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 KDM4BO94953 1096 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 TFF1P04155 84 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 ALDOBP05062 364 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 SELLP14151 372 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 MAPK3P27361 379 aaPredicted RBP13.86□□□□□ -0.19
CLK3-207ENST00000562389 MAP2K4P45985 399 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 ZP1P60852 638 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 MLLT11Q13015 90 aaPredicted RBP13.86□□□□□ -0.19
CLK3-207ENST00000562389 IKZF1Q13422 519 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 DGUOKQ16854 277 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 MS4A15Q8N5U1 240 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 CD177Q8N6Q3 437 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 ZSCAN4Q8NAM6 433 aaPredicted RBP13.86□□□□□ -0.19
CLK3-207ENST00000562389 EMG1Q92979 244 aaKnown RBP13.86□□□□□ -0.19
CLK3-207ENST00000562389 DERL3Q96Q80 235 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 MRI1Q9BV20 369 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 RHOFQ9HBH0 211 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 TMEM138Q9NPI0 162 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 CKLFQ9UBR5 152 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 MAB21L2Q9Y586 359 aa13.86□□□□□ -0.19
CLK3-207ENST00000562389 C2CD3Q4AC94 2353 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 IGKV1-12A0A0C4DH73 117 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 IGKV1D-12P01611 117 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 LIPFP07098 398 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 BCL3P20749 454 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 PRDX2P32119 198 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 SRP14P37108 136 aaKnown RBP13.85□□□□□ -0.19
CLK3-207ENST00000562389 NPBWR2P48146 333 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 CAV3P56539 151 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 TPBGQ13641 420 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 BTN2A1Q7KYR7 527 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 ZNF367Q7RTV3 350 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 C1QL2Q7Z5L3 287 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 FGFRL1Q8N441 504 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 ZNF561Q8N587 486 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 OR52N4Q8NGI2 321 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 OR5D18Q8NGL1 313 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 ORAI1Q96D31 301 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 SEBOXQ9HB31 216 aaPredicted RBP13.85□□□□□ -0.19
CLK3-207ENST00000562389 RBFOX1Q9NWB1 397 aaKnown RBP13.85□□□□□ -0.19
CLK3-207ENST00000562389 SLC25A10Q9UBX3 287 aaPredicted RBP13.85□□□□□ -0.19
CLK3-207ENST00000562389 FOXJ3Q9UPW0 622 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 AUP1Q9Y679 476 aa13.85□□□□□ -0.19
CLK3-207ENST00000562389 ANGPTL7O43827 346 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 INMTO95050 263 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 HSMCR30P0CW71 290 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 PPIAL4GP0DN37 164 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 BDKRB2P30411 391 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 DDI2Q5TDH0 399 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 LIPKQ5VXJ0 399 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 FIP1L1Q6UN15 594 aaKnown RBP13.84□□□□□ -0.19
CLK3-207ENST00000562389 FAM58AQ8N1B3 248 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 PNLDC1Q8NA58 520 aaKnown RBP13.84□□□□□ -0.19
CLK3-207ENST00000562389 ZNRF1Q8ND25 227 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 PXT1Q8NFP0 134 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 DMRTB1Q96MA1 342 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 MGLLQ99685 303 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 TMED9Q9BVK6 235 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 ACOT13Q9NPJ3 140 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 OR14J1Q9UGF5 321 aa13.84□□□□□ -0.19
CLK3-207ENST00000562389 RPUSD1Q9UJJ7 312 aaKnown RBP13.84□□□□□ -0.19
CLK3-207ENST00000562389 SVEP1Q4LDE5 3571 aa13.83□□□□□ -0.19
CLK3-207ENST00000562389 TRAV8-7A0A075B6U6 113 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 GABRPO00591 440 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 PIN1P1O15428 100 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 SC5DO75845 299 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 FSHBP01225 129 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 CPEP16870 476 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 TGFBR2P37173 567 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 CEBPDP49716 269 aaPredicted RBP13.83□□□□□ -0.2
CLK3-207ENST00000562389 ACSM3Q53FZ2 586 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 SPIN3Q5JUX0 258 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 UNQ9370/PRO34162Q6UXP9 181 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 SATL1Q86VE3 508 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 SVOPQ8N4V2 548 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 LY6G5BQ8NDX9 201 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 TMEM185AQ8NFB2 350 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 C8orf46Q8TAG6 207 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 NANPQ8TBE9 248 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 GPER1Q99527 375 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 DCTN5Q9BTE1 182 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 HMG20AQ9NP66 347 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 NOX4Q9NPH5 578 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 METRNQ9UJH8 293 aa13.83□□□□□ -0.2
CLK3-207ENST00000562389 A0A1W2PPK0 400 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 MAGEA13PA6NCF6 341 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 SFTPBP07988 381 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 CHRM2P08172 466 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 TMEM225BP0DP42 221 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 NDUFB7P17568 137 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 PRKACAP17612 351 aa13.82□□□□□ -0.2
CLK3-207ENST00000562389 ADRA2CP18825 462 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms