RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 TNFSF4P23510 183 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 GABRR1P24046 479 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 GRNP28799 593 aaKnown RBP12.14□□□□□ -0.47
COMMD4-205ENST00000562310 PMELP40967 661 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 CDSNQ15517 529 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 NKPD1Q17RQ9 610 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 PLAC9Q5JTB6 97 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 ADAM5Q6NVV9 412 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 FIP1L1Q6UN15 594 aaKnown RBP12.14□□□□□ -0.47
COMMD4-205ENST00000562310 LRP11Q86VZ4 500 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 OR2Z1Q8NG97 314 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 ELMOD3Q96FG2 381 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 ARHGAP5-AS1Q96IT6 56 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 NEDD4LQ96PU5 975 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 DIRC2Q96SL1 478 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 PECRQ9BY49 303 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 MSL2Q9HCI7 577 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 MTCH1Q9NZJ7 389 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 TAAR3PQ9P1P4 343 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 ZDHHC8Q9ULC8 765 aa12.14□□□□□ -0.47
COMMD4-205ENST00000562310 IGSF10Q6WRI0 2623 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 NBASA2RRP1 2371 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 WIPF3A6NGB9 483 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 ZSCAN5BA6NJL1 495 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 SHISA9B4DS77 424 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 F5H5P2 479 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 NOS1APO75052 506 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-205ENST00000562310 PDCD6O75340 191 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 PGA5P0DJD9 388 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 GNB3P16520 340 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 CHATP28329 748 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 NPBWR2P48146 333 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 SRP9P49458 86 aaKnown RBP12.13□□□□□ -0.47
COMMD4-205ENST00000562310 ZNF81P51508 661 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 TMEM50BP56557 158 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 GUCA2AQ02747 115 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 ADIPOQQ15848 244 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 TAF9Q16594 264 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 PIGYQ3MUY2 71 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 OLFML2AQ68BL7 652 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 GDPD3Q7L5L3 318 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 TRAPPC6BQ86SZ2 158 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 DMRTC2Q8IXT2 367 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-205ENST00000562310 FAM58AQ8N1B3 248 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 POC1AQ8NBT0 407 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 LINC01560Q8TB33 94 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 ST8SIA4Q92187 359 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 EMG1Q92979 244 aaKnown RBP12.13□□□□□ -0.47
COMMD4-205ENST00000562310 NRIP2Q9BQI9 281 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 OCEL1Q9H607 264 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 SPACA1Q9HBV2 294 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 IFT46Q9NQC8 304 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 PLEKHJ1Q9NW61 149 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 KLK11Q9UBX7 282 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 PLEKHA6Q9Y2H5 1048 aa12.13□□□□□ -0.47
COMMD4-205ENST00000562310 FAM240BA0A1B0GVZ2 78 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 A6NLC8 198 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 GEMIN2O14893 280 aaKnown RBP12.12□□□□□ -0.47
COMMD4-205ENST00000562310 GRPP07492 148 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 ADH4P08319 380 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 OR4A8P0C604 315 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 PRKACAP17612 351 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 TBPP20226 339 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 FUT3P21217 361 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 RFX2P48378 723 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 TAS2R19P59542 299 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 ERVK11-1P61568 191 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 MAB21L1Q13394 359 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 ARFRP1Q13795 201 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 PCGF3Q3KNV8 242 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 NRARPQ7Z6K4 114 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 TMEM229BQ8NBD8 167 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 OR10Z1Q8NGY1 313 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 BBC3Q96PG8 261 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-205ENST00000562310 IFT22Q9H7X7 185 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 ZMAT3Q9HA38 289 aaKnown RBP12.12□□□□□ -0.47
COMMD4-205ENST00000562310 NPDC1Q9NQX5 325 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-205ENST00000562310 COPZ2Q9P299 210 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 ANAPC10Q9UM13 185 aa12.12□□□□□ -0.47
COMMD4-205ENST00000562310 HELZ2Q9BYK8 2649 aaKnown RBP12.12□□□□□ -0.47
COMMD4-205ENST00000562310 PLCE1Q9P212 2302 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 CDIPTO14735 213 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 RHBDL1O75783 438 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 OR7C1O76099 320 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-205ENST00000562310 NXPH2O95156 264 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 GLAP06280 429 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 AKAIN1P0CW23 69 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 SERPINF1P36955 418 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 GATA4P43694 442 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 MRPS15P82914 257 aaKnown RBP12.11□□□□□ -0.47
COMMD4-205ENST00000562310 EFNB3Q15768 340 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 ACTBL2Q562R1 376 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 SPIN3Q5JUX0 258 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 SIGIRRQ6IA17 410 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 CCBE1Q6UXH8 406 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-205ENST00000562310 ZNF843Q8N446 348 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 NUDCD2Q8WVJ2 157 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 ERGIC1Q969X5 290 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 MEGF10Q96KG7 1140 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms