RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 MOB3CQ70IA8 216 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 BHLHA15Q7RTS1 189 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-210ENST00000561817 FJX1Q86VR8 437 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 CALHM1Q8IU99 346 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 TMEM229BQ8NBD8 167 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 CSNK2A3Q8NEV1 391 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 OR4D10Q8NGI6 311 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 OR5D18Q8NGL1 313 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 OR4C16Q8NGL9 310 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 OR10K1Q8NGX5 313 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 PIGCQ92535 297 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 SNRNP40Q96DI7 357 aaKnown RBP5.59□□□□□ -1.51
CAPN3-210ENST00000561817 GAL3ST1Q99999 423 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 SFXN3Q9BWM7 321 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 TMEM59Q9BXS4 323 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 CACNG6Q9BXT2 260 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 SELENOIQ9C0D9 397 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 DPAGT1Q9H3H5 408 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 ZMAT4Q9H898 229 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF629Q9UEG4 869 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-210ENST00000561817 KCNN3Q9UGI6 736 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 ING4Q9UNL4 249 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 NUBP2Q9Y5Y2 271 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 SLC25A15Q9Y619 301 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 ALG5Q9Y673 324 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 FAM208BQ5VWN6 2430 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 COL6A6A6NMZ7 2263 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 IGHV1-18A0A0C4DH31 117 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 A0A0G2JNJ9 132 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 A0A1B0GWJ7 208 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 FAM230AA0A1W2PPH8 454 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 MEIS3P1A6NDR6 274 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 OR5H1A6NKK0 313 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 AKR7A2O43488 359 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 SPRY1O43609 319 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 ANGPTL7O43827 346 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 CRTAPO75718 401 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 AGFG2O95081 481 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 NDUFB6O95139 128 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 CD3DP04234 171 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 CECR9P0C854 216 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 GNB3P16520 340 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 PSMB1P20618 241 aaKnown RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 MPZP25189 248 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 RBP2P50120 134 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 IDH3GP51553 393 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 ATP1B3P54709 279 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 AP3S2P59780 193 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 UBE2NP61088 152 aaKnown RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 PPP1CBP62140 327 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 MALLQ13021 153 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 PNLIPRP3Q17RR3 467 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 TBC1D28Q2M2D7 210 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 PCGF3Q3KNV8 242 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 CEACAM21Q3KPI0 293 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 C3orf36Q3SXR2 165 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 RSBN1Q5VWQ0 802 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 PLCXD3Q63HM9 321 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 SFRP4Q6FHJ7 346 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 FAAP20Q6NZ36 180 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 C3P1Q6ZMU1 363 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 MRPL21Q7Z2W9 205 aaKnown RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 SAXO1Q8IYX7 474 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 ZNF843Q8N446 348 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 PNLDC1Q8NA58 520 aaKnown RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 ZSCAN4Q8NAM6 433 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 OR56B1Q8NGI3 324 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 OR6F1Q8NGZ6 308 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 NUDCD2Q8WVJ2 157 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 OR5P3Q8WZ94 311 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 BORCS8Q96FH0 119 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 MARS2Q96GW9 593 aaKnown RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 ARHGAP5-AS1Q96IT6 56 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 ST6GAL2Q96JF0 529 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 GPER1Q99527 375 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 CST11Q9H112 138 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 TP63Q9H3D4 680 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 SEPSECSQ9HD40 501 aaKnown RBP5.58□□□□□ -1.52
CAPN3-210ENST00000561817 ASF1BQ9NVP2 202 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 TAS2R8Q9NYW2 309 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 JKAMPQ9P055 326 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 ZNF581Q9P0T4 197 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 COPZ2Q9P299 210 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 Q9UFV3 132 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 ZNF221Q9UK13 617 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 EDARQ9UNE0 448 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 ZFYVE26Q68DK2 2539 aa5.58□□□□□ -1.52
CAPN3-210ENST00000561817 SHANK1Q9Y566 2161 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 POLEQ07864 2286 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 A0A0A6YYJ9 748 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 IGHV2OR16-5A0A0B4J2B6 119 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 CENPXA8MT69 81 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 IQCF6A8MYZ5 107 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 F8VVB4 439 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 F8VWA3 439 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 SHOXO15266 292 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 C1QL1O75973 258 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 SFTPBP07988 381 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 AKAIN1P0CW23 69 aa5.57□□□□□ -1.52
CAPN3-210ENST00000561817 TMEM225BP0DP42 221 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms