RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 IL18R1Q13478 541 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 AWAT1Q58HT5 328 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 C16orf87Q6PH81 154 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 LHFPL2Q6ZUX7 228 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 Q8IYB0 196 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 TMEM86BQ8N661 226 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 SETD9Q8NE22 299 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 OPALINQ96PE5 141 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 CAB39Q9Y376 341 aaPredicted RBP12.69□□□□□ -0.38
CCDC113-203ENST00000561517 A0A0U1RQK1 487 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 IRGMA1A4Y4 181 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 ANKRD65E5RJM6 399 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 K7N7A8 449 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 ZNF737O75373 536 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 ALX3O95076 343 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 TK1P04183 234 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 CHRM2P08172 466 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 ETV1P50549 477 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 DLX1P56177 255 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 MTCP1P56278 107 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 RPL31P62899 125 aaKnown RBP12.68□□□□□ -0.38
CCDC113-203ENST00000561517 FOXL1Q12952 345 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 BLMHQ13867 455 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 NCR3LG1Q68D85 454 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 LDLRAD3Q86YD5 345 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 PDZD9Q8IXQ8 264 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 PARP16Q8N5Y8 322 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 OR5AK2Q8NH90 309 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 RPS4Y2Q8TD47 263 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 PDCD1LG2Q9BQ51 273 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 COMMD4Q9H0A8 199 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 ZCCHC4Q9H5U6 513 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 POMT1Q9Y6A1 747 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 HSPE1-MOB4S4R3N1 261 aa12.68□□□□□ -0.38
CCDC113-203ENST00000561517 TRBV2A0A0J9YWF9 115 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 H0YAE9 185 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 NPBWR2P48146 333 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 POU3F4P49335 361 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 UBE2E1P51965 193 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 GTF2A1P52655 376 aaPredicted RBP12.67□□□□□ -0.38
CCDC113-203ENST00000561517 COL10A1Q03692 680 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 PRB3Q04118 309 aaPredicted RBP12.67□□□□□ -0.38
CCDC113-203ENST00000561517 PDZK1IP1Q13113 114 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 KLRD1Q13241 179 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 CCDC58Q4VC31 144 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 TMEM200BQ69YZ2 307 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 CRIP3Q6Q6R5 217 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 C11orf42Q8N5U0 333 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 OR5D13Q8NGL4 314 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 OR13C9Q8NGT0 318 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 TBC1D15Q8TC07 691 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 SSMEM1Q8WWF3 244 aa12.67□□□□□ -0.38
CCDC113-203ENST00000561517 EMG1Q92979 244 aaKnown RBP12.67□□□□□ -0.38
CCDC113-203ENST00000561517 DIMT1Q9UNQ2 313 aaKnown RBP12.67□□□□□ -0.38
CCDC113-203ENST00000561517 HAX1O00165 279 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 NPFFO15130 113 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 SPRY1O43609 319 aaPredicted RBP12.66□□□□□ -0.38
CCDC113-203ENST00000561517 INMTO95050 263 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 CYB5AP00167 134 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 BCL3P20749 454 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 EEF1B2P24534 225 aaKnown RBP12.66□□□□□ -0.38
CCDC113-203ENST00000561517 CAPGP40121 348 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 ZNF146Q15072 292 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 OR2G6Q5TZ20 316 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 XAF1Q6GPH4 301 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 HCP5Q6MZN7 132 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 RPL22L1Q6P5R6 122 aaKnown RBP12.66□□□□□ -0.38
CCDC113-203ENST00000561517 TMPRSS11AQ6ZMR5 421 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 RNF144BQ7Z419 303 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 SERPINA12Q8IW75 414 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 FAM58AQ8N1B3 248 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 C3orf56Q8N813 242 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 ASCC1Q8N9N2 400 aaKnown RBP12.66□□□□□ -0.38
CCDC113-203ENST00000561517 OR4M1Q8NGD0 313 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 OR5D14Q8NGL3 314 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 FBLIM1Q8WUP2 373 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 SNX22Q96L94 193 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 DCLRE1BQ9H816 532 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 NEK6Q9HC98 313 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 RBFOX1Q9NWB1 397 aaKnown RBP12.66□□□□□ -0.38
CCDC113-203ENST00000561517 DHDHQ9UQ10 334 aa12.66□□□□□ -0.38
CCDC113-203ENST00000561517 EXOSC1Q9Y3B2 195 aaKnown RBP12.66□□□□□ -0.38
CCDC113-203ENST00000561517 IGKV1-12A0A0C4DH73 117 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 A0A1W2PPH5 198 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 SULT1B1O43704 296 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 KDM4BO94953 1096 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 HAND1O96004 215 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 IGKV1D-12P01611 117 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 GNAO1P09471 354 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 OCM2P0CE71 109 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 OCMP0CE72 109 aaPredicted RBP12.65□□□□□ -0.38
CCDC113-203ENST00000561517 IER3P46695 156 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 ACSM1Q08AH1 577 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 ZNF273Q14593 569 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 CDK5R1Q15078 307 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 LAIR2Q6ISS4 152 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 C17orf107Q6ZR85 190 aa12.65□□□□□ -0.38
CCDC113-203ENST00000561517 SAXO1Q8IYX7 474 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms