RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 CRIP3Q6Q6R5 217 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 HAVCR2Q8TDQ0 301 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 SPSB1Q96BD6 273 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 SIRT7Q9NRC8 400 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 ZFPL1O95159 310 aa16.91■□□□□ 0.3
TPM1-232ENST00000561425 CHRM2P08172 466 aa16.91■□□□□ 0.3
TPM1-232ENST00000561425 AZGP1P25311 298 aaKnown RBP16.91■□□□□ 0.3
TPM1-232ENST00000561425 IER3P46695 156 aa16.91■□□□□ 0.3
TPM1-232ENST00000561425 CEBPDP49716 269 aaPredicted RBP16.91■□□□□ 0.3
TPM1-232ENST00000561425 UBE2E1P51965 193 aa16.91■□□□□ 0.3
TPM1-232ENST00000561425 ATP1B3P54709 279 aa16.91■□□□□ 0.3
TPM1-232ENST00000561425 TTC23Q5W5X9 447 aa16.91■□□□□ 0.3
TPM1-232ENST00000561425 NCR3LG1Q68D85 454 aa16.91■□□□□ 0.3
TPM1-232ENST00000561425 TMEM200BQ69YZ2 307 aa16.91■□□□□ 0.3
TPM1-232ENST00000561425 SLC25A26Q70HW3 274 aa16.91■□□□□ 0.3
TPM1-232ENST00000561425 A0A1W2PQ09 198 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 H0YJX3 145 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 DCKP27707 260 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 AQP4P55087 323 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 DLX1P56177 255 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 MTCP1P56278 107 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 IZUMO2Q6UXV1 221 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 LHFPL2Q6ZUX7 228 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 PDZD9Q8IXQ8 264 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 MKXQ8IYA7 352 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 Q8IYB0 196 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 BATF2Q8N1L9 274 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 PARP16Q8N5Y8 322 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 C3orf56Q8N813 242 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 TBC1D15Q8TC07 691 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 RPS4Y2Q8TD47 263 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 SSMEM1Q8WWF3 244 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 SLAMF9Q96A28 289 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 ZNF747Q9BV97 191 aa16.9■□□□□ 0.3
TPM1-232ENST00000561425 TENM1Q9UKZ4 2725 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 TMEM212A6NML5 194 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 NPFFO15130 113 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 CLIC3O95833 236 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 RPL31P62899 125 aaKnown RBP16.89■□□□□ 0.29
TPM1-232ENST00000561425 COL10A1Q03692 680 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 ACSM1Q08AH1 577 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 PDZK1IP1Q13113 114 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 BLMHQ13867 455 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 DHRSXQ8N5I4 330 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 ZNF676Q8N7Q3 588 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 OR5D13Q8NGL4 314 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 CYGBQ8WWM9 190 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 OPALINQ96PE5 141 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 CHIAQ9BZP6 476 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 MMP24Q9Y5R2 645 aa16.89■□□□□ 0.29
TPM1-232ENST00000561425 TRBV2A0A0J9YWF9 115 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 HAX1O00165 279 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 CCDC159P0C7I6 412 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 ZNF20P17024 532 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 NPBWR2P48146 333 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 HSPA13P48723 471 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 CAPZA1P52907 286 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 GBX2P52951 348 aaPredicted RBP16.88■□□□□ 0.29
TPM1-232ENST00000561425 DLX6P56179 175 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 RPL15P61313 204 aaKnown RBP16.88■□□□□ 0.29
TPM1-232ENST00000561425 PRB3Q04118 309 aaPredicted RBP16.88■□□□□ 0.29
TPM1-232ENST00000561425 KLRD1Q13241 179 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 IL18R1Q13478 541 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 ZNF146Q15072 292 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 CCDC58Q4VC31 144 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 ZNF529Q6P280 563 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 RNF144BQ7Z419 303 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 FAM185AQ8N0U4 392 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 OR13C3Q8NGS6 347 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 OR5AK2Q8NH90 309 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 CNIH3Q8TBE1 160 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 AJUBAQ96IF1 538 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 ZCCHC4Q9H5U6 513 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 OR14J1Q9UGF5 321 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 CAB39Q9Y376 341 aaPredicted RBP16.88■□□□□ 0.29
TPM1-232ENST00000561425 HSPE1-MOB4S4R3N1 261 aa16.88■□□□□ 0.29
TPM1-232ENST00000561425 IGKV1-12A0A0C4DH73 117 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 TMEM82A0PJX8 343 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 IRGMA1A4Y4 181 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 FAM181BA6NEQ2 426 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 POM121CA8CG34 1229 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 IGKV1D-12P01611 117 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 EEF1B2P24534 225 aaKnown RBP16.87■□□□□ 0.29
TPM1-232ENST00000561425 ETV1P50549 477 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 C17orf107Q6ZR85 190 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 SERPINA12Q8IW75 414 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 SNX22Q96L94 193 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 PDCD1LG2Q9BQ51 273 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 RHOFQ9HBH0 211 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 ZNRD1Q9P1U0 126 aa16.87■□□□□ 0.29
TPM1-232ENST00000561425 DIMT1Q9UNQ2 313 aaKnown RBP16.87■□□□□ 0.29
TPM1-232ENST00000561425 SF3B6Q9Y3B4 125 aaKnown RBP16.87■□□□□ 0.29
TPM1-232ENST00000561425 A0A1W2PPH5 198 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 C17orf98A8MV24 154 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 H0YAE9 185 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 KDM4BO94953 1096 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 NDUFA7O95182 113 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 BCL3P20749 454 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 CAPGP40121 348 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 GTF2A1P52655 376 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms