RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZNF676Q8N7Q3 588 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 C5orf56Q8N8D9 126 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 LRRC75AQ8NAA5 344 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 OR4D11Q8NGI4 311 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 OR4P4Q8NGL7 312 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 DLX4Q92988 240 aaPredicted RBP4.07□□□□□ -1.76
HERC1-213ENST00000561359 Q96M85 177 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 RTL8AQ9BWD3 113 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 OSBPL10Q9BXB5 764 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 OPA3Q9H6K4 179 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 AIG1Q9NVV5 245 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 SIGLEC8Q9NYZ4 499 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 NDUFA13Q9P0J0 144 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 DNAJB9Q9UBS3 223 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 GLS2Q9UI32 602 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 ZNF222Q9UK12 451 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 HHLA2Q9UM44 414 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 SESN1Q9Y6P5 492 aa4.07□□□□□ -1.76
HERC1-213ENST00000561359 PRSS29PA6NIE9 313 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 SMIM23A6NLE4 172 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 TMEM210A6NLX4 147 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 LINC01548A6NM66 108 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 LEUTXA8MZ59 168 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 I3L521 148 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 PSMD9O00233 223 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 RIPK2O43353 540 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 CNIH1O95406 144 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 IGHG2P01859 326 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 CD14P08571 375 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 OR8U9P0C7N5 309 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 SLC2A1P11166 492 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 IFI30P13284 250 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 CALB2P22676 271 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 ANOS1P23352 680 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 FASP25445 335 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 PRDX2P32119 198 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 MNDAP41218 407 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 SLC9A3P48764 834 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 EDDM3BP56851 147 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 ISL1P61371 349 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 GNB1P62873 340 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 PITPNAQ00169 270 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.06□□□□□ -1.76
HERC1-213ENST00000561359 KRR1Q13601 381 aaKnown RBP4.06□□□□□ -1.76
HERC1-213ENST00000561359 SPCS2Q15005 226 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 TIGD6Q17RP2 521 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 SLC18B1Q6NT16 456 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 CCDC144NLQ6NUI1 221 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 TMEM65Q6PI78 240 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 DRAM2Q6UX65 266 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 MAVSQ7Z434 540 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 OAFQ86UD1 273 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 GTSCR1Q86UQ5 136 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 ZNF575Q86XF7 245 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 SLC7A5P1Q8MH63 180 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 ZNF561Q8N587 486 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 CD177Q8N6Q3 437 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 ZNF781Q8N8C0 355 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 RNF152Q8N8N0 203 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 GPR32P1Q8NGA4 272 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 TRMT10AQ8TBZ6 339 aaKnown RBP4.06□□□□□ -1.76
HERC1-213ENST00000561359 BPIFA2Q96DR5 249 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 RNF170Q96K19 258 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 ZNF714Q96N38 554 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 MLST8Q9BVC4 326 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 NUAK2Q9H093 628 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 NSRP1Q9H0G5 558 aaKnown RBP4.06□□□□□ -1.76
HERC1-213ENST00000561359 TMEM133Q9H2Q1 129 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 GNB4Q9HAV0 340 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 RHBDD3Q9Y3P4 386 aa4.06□□□□□ -1.76
HERC1-213ENST00000561359 OR6C68A6NDL8 312 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 ARRDC5A6NEK1 342 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 B5MCH6 92 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 M0QX08 132 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 FGF16O43320 207 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 XRCC3O43542 346 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 XRCC2O43543 280 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 ITM2AO43736 263 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 HLA-DQA2P01906 255 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 TK1P04183 234 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 IGF1P05019 195 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 HNRNPCP07910 306 aaKnown RBP eCLIP4.05□□□□□ -1.76
HERC1-213ENST00000561359 TMEM11P17152 192 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 CRABP1P29762 137 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 CEACAM3P40198 252 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 KIR3DL2P43630 455 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 GPR12P47775 334 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 PRKXP51817 358 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 FAM3AP98173 230 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 BDH1Q02338 343 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 GFOD2Q3B7J2 385 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 SMIM21Q3B7S5 101 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 SLC36A3Q495N2 470 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 C19orf54Q5BKX5 351 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 FAM53AQ6NSI3 398 aaPredicted RBP4.05□□□□□ -1.76
HERC1-213ENST00000561359 MSANTD1Q6ZTZ1 278 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 SLC16A9Q7RTY1 509 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 LYSMD2Q8IV50 215 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 PGAM4Q8N0Y7 254 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 ABHD12Q8N2K0 398 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms