RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 MTCH1Q9NZJ7 389 aa21.87■■□□□ 1.09
SNRPA1-215ENST00000561187 PLXNB1O43157 2135 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 A0A1W2PQL4 384 aaPredicted RBP21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 C17orf98A8MV24 154 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 CALCBP10092 127 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 CCL1P22362 96 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 EFNB1P98172 346 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 CCBE1Q6UXH8 406 aaPredicted RBP21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 SLC25A26Q70HW3 274 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 TCF23Q7RTU1 214 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 CFHR4Q92496 578 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 CHST6Q9GZX3 395 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 TCF19Q9Y242 345 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 NOTCH3Q9UM47 2321 aa21.86■■□□□ 1.09
SNRPA1-215ENST00000561187 ZNF737O75373 536 aa21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 OPN1MWP04001 364 aa21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 ZNF728P0DKX0 622 aa21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 OPN1MW2P0DN77 364 aa21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 OPN1MW3P0DN78 364 aa21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 KDM4DQ6B0I6 523 aa21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 C11orf88Q6PI97 169 aa21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 LIAT1Q6ZQX7 453 aa21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 OR13D1Q8NGV5 346 aa21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 EMG1Q92979 244 aaKnown RBP21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 CIB1Q99828 191 aa21.85■■□□□ 1.09
SNRPA1-215ENST00000561187 DSCAML1Q8TD84 2053 aa21.84■■□□□ 1.09
SNRPA1-215ENST00000561187 TMEM82A0PJX8 343 aa21.84■■□□□ 1.09
SNRPA1-215ENST00000561187 DHRS7CA6NNS2 312 aa21.84■■□□□ 1.09
SNRPA1-215ENST00000561187 ODF3BA8MYP8 253 aa21.84■■□□□ 1.09
SNRPA1-215ENST00000561187 IGHA1P01876 353 aa21.84■■□□□ 1.09
SNRPA1-215ENST00000561187 CD28P10747 220 aa21.84■■□□□ 1.09
SNRPA1-215ENST00000561187 POLR2IP36954 125 aaKnown RBP21.84■■□□□ 1.09
SNRPA1-215ENST00000561187 BEAN1Q3B7T3 259 aa21.84■■□□□ 1.09
SNRPA1-215ENST00000561187 RIBC2Q9H4K1 309 aa21.84■■□□□ 1.09
SNRPA1-215ENST00000561187 HILPDAQ9Y5L2 63 aa21.84■■□□□ 1.09
SNRPA1-215ENST00000561187 LOC107986453A0A1B0GWG9 222 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 FAM90A8PA6NJQ4 464 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 FBXO24O75426 580 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 CHRM2P08172 466 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 IGHV1-8P0DP01 117 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 DUSP1P28562 367 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 POU3F4P49335 361 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 TMEM95Q3KNT9 176 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 ARSJQ5FYB0 599 aaPredicted RBP21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 Q6ZSR3 168 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 ZDHHC13Q8IUH4 622 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 RDH10Q8IZV5 341 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 RPS4Y2Q8TD47 263 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 FOXRED1Q96CU9 486 aaPredicted RBP21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 BORCS8Q96FH0 119 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 ZNF714Q96N38 554 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 ADI1Q9BV57 179 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 GABARAPL1Q9H0R8 117 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 SERTAD4Q9NUC0 356 aa21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 WARS2Q9UGM6 360 aaKnown RBP21.83■■□□□ 1.09
SNRPA1-215ENST00000561187 METTL15A6NJ78 407 aa21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 GATBO75879 557 aaKnown RBP21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 GABRR1P24046 479 aa21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 ATP6V1E1P36543 226 aa21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 TP53I3Q53FA7 332 aa21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 ZNF626Q68DY1 528 aa21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 EGFL6Q8IUX8 553 aa21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 OR8H2Q8N162 312 aa21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 PRSS35Q8N3Z0 413 aa21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 CHST5Q9GZS9 411 aa21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 RBFOX1Q9NWB1 397 aaKnown RBP21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 GNG8Q9UK08 70 aa21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 TBL2Q9Y4P3 447 aaKnown RBP21.82■■□□□ 1.08
SNRPA1-215ENST00000561187 A6NDX4 124 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 VGLL3A8MV65 326 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 HAND1O96004 215 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 FASP25445 335 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 HTR1FP30939 366 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 ACTA2P62736 377 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 ACTG2P63267 376 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 ACTC1P68032 377 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 ACTA1P68133 377 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 CNN3Q15417 329 aaKnown RBP21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 GRK1Q15835 563 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 SAMD5Q5TGI4 173 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 ZNF676Q8N7Q3 588 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 CDCA4Q9BXL8 241 aa21.81■■□□□ 1.08
SNRPA1-215ENST00000561187 F2RL2O00254 374 aa21.8■■□□□ 1.08
SNRPA1-215ENST00000561187 PEX14O75381 377 aa21.8■■□□□ 1.08
SNRPA1-215ENST00000561187 KIR3DL2P43630 455 aa21.8■■□□□ 1.08
SNRPA1-215ENST00000561187 NPBWR2P48146 333 aa21.8■■□□□ 1.08
SNRPA1-215ENST00000561187 FUT6P51993 359 aa21.8■■□□□ 1.08
SNRPA1-215ENST00000561187 SLC34A1Q06495 639 aa21.8■■□□□ 1.08
SNRPA1-215ENST00000561187 Q6ZS46 218 aa21.8■■□□□ 1.08
SNRPA1-215ENST00000561187 OR52N4Q8NGI2 321 aa21.8■■□□□ 1.08
SNRPA1-215ENST00000561187 NDNFQ8TB73 568 aa21.8■■□□□ 1.08
SNRPA1-215ENST00000561187 OR2T7P0C7T2 308 aa21.79■■□□□ 1.08
SNRPA1-215ENST00000561187 BCL3P20749 454 aa21.79■■□□□ 1.08
SNRPA1-215ENST00000561187 OR12D2P58182 307 aa21.79■■□□□ 1.08
SNRPA1-215ENST00000561187 FAM220AQ7Z4H9 259 aa21.79■■□□□ 1.08
SNRPA1-215ENST00000561187 TRAPPC6BQ86SZ2 158 aa21.79■■□□□ 1.08
SNRPA1-215ENST00000561187 OR11H6Q8NGC7 330 aa21.79■■□□□ 1.08
SNRPA1-215ENST00000561187 RFT1Q96AA3 541 aa21.79■■□□□ 1.08
SNRPA1-215ENST00000561187 MALSU1Q96EH3 234 aa21.79■■□□□ 1.08
SNRPA1-215ENST00000561187 SNX22Q96L94 193 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms