RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 SCGB2B2Q4G0G5 96 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 SLC22A6Q4U2R8 563 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 TMEM128Q5BJH2 165 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 TMEM31Q5JXX7 168 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 AVPI1Q5T686 147 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 AADACL3Q5VUY0 350 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 OR52W1Q6IF63 320 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 OR10K2Q6IF99 312 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 H3F3CQ6NXT2 135 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 HAGHLQ6PII5 290 aaPredicted RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 BTNL8Q6UX41 500 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 TMPPEQ6ZT21 453 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 FOXL2NBQ6ZUU3 175 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 COX15Q7KZN9 410 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 C16orf82Q7Z2V1 217 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 MARCH3Q86UD3 253 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 RTN4RL2Q86UN3 420 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 CBLN2Q8IUK8 224 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 LINC00346Q8IVM7 164 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 WDFY1Q8IWB7 410 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 SKA3Q8IX90 412 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 BAP18Q8IXM2 172 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 PRR22Q8IZ63 422 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 KDM8Q8N371 416 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 FAM89BQ8N5H3 189 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 COMMD1Q8N668 190 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 METTL27Q8N6F8 245 aaPredicted RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 GVQW1Q8N7I0 195 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 PRR26Q8N8Z3 221 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 INO80EQ8NBZ0 244 aaPredicted RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 ADAD2Q8NCV1 583 aaKnown RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 OR4S1Q8NGB4 309 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 OR8B12Q8NGG6 310 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 OR52N4Q8NGI2 321 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 OR1N1Q8NGS0 311 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 OR8S1Q8NH09 359 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 TERB2Q8NHR7 220 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 LYPD6BQ8NI32 183 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 KCNG3Q8TAE7 436 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 MARCH1Q8TCQ1 289 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 TMEM234Q8WY98 164 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 DCUN1D4Q92564 292 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 DAZLQ92904 295 aaKnown RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 CMBLQ96DG6 245 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 SLAMF6Q96DU3 332 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 ADAT3Q96EY9 351 aaPredicted RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 WDYHV1Q96HA8 205 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 C2orf50Q96LR7 162 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 FOXN4Q96NZ1 517 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 TGM7Q96PF1 710 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 DUX5Q96PT3 197 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 GAL3ST4Q96RP7 486 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 NKX3-1Q99801 234 aaPredicted RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 NICN1Q9BSH3 213 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 RNF126Q9BV68 326 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 TM2D1Q9BX74 207 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 TMEM59Q9BXS4 323 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 MRPL13Q9BYD1 178 aaKnown RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 TBL1XR1Q9BZK7 514 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 SPRY4Q9C004 299 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 OR11A1Q9GZK7 315 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 OR8D2Q9GZM6 311 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 VN1R1Q9GZP7 353 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 EGLN1Q9GZT9 426 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 PBOV1Q9GZY1 135 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 SLC26A1Q9H2B4 701 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 ARV1Q9H2C2 271 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 C5orf66Q9H5L9 145 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 ESRP2Q9H6T0 727 aaKnown RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 PNRC2Q9NPJ4 139 aaKnown RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 PNO1Q9NRX1 252 aaKnown RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 CUTCQ9NTM9 273 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 ZFP57Q9NU63 452 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 ALKBH4Q9NXW9 302 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 RCC2Q9P258 522 aaKnown RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 MYEF2Q9P2K5 600 aaKnown RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 B3GAT1Q9P2W7 334 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 GHRLQ9UBU3 117 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 COPS7AQ9UBW8 275 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 NPIPA1Q9UND3 350 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 GTF2A1LQ9UNN4 478 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 GPR132Q9UNW8 380 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 B3GALT5Q9Y2C3 310 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 MRPS28Q9Y2Q9 187 aaKnown RBP2.13□□□□□ -2.07
SPG11-223ENST00000560858 CSAG2Q9Y5P2 127 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 WIF1Q9Y5W5 379 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 LHFPL6Q9Y693 200 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 PIAS3Q9Y6X2 628 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 TRANK1O15050 2925 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 ASXL3Q9C0F0 2248 aa2.13□□□□□ -2.07
SPG11-223ENST00000560858 CHD9Q3L8U1 2897 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 ARHGAP21Q5T5U3 1957 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 BRWD1Q9NSI6 2320 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 MYO9BQ13459 2157 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 UNC13CQ8NB66 2214 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 A0A087WWL8 130 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 IGHV1OR21-1A0A087WYE8 117 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 IGKV1-9A0A0C4DH69 117 aa2.12□□□□□ -2.07
SPG11-223ENST00000560858 A0A0U1RQV5 110 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms