RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ZDHHC22Q8N966 263 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 SLAMF9Q96A28 289 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 MRGPRFQ96AM1 343 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 SULT4A1Q9BR01 284 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 SEC22CQ9BRL7 303 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 FAAP24Q9BTP7 215 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 CHST6Q9GZX3 395 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 PLK3Q9H4B4 646 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 ZNF581Q9P0T4 197 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 PURGQ9UJV8 347 aaKnown RBP11.02□□□□□ -0.64
SNX1-211ENST00000560829 TINAGQ9UJW2 476 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 POU2F3Q9UKI9 436 aa11.02□□□□□ -0.64
SNX1-211ENST00000560829 A0A1B0GWJ7 208 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 TMEM82A0PJX8 343 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 LRP5LA4QPB2 252 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 CEACAM18A8MTB9 384 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 TRAPPC2LH3BP13 241 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 SYNGR1O43759 233 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 CREBL2O60519 120 aaPredicted RBP11.02□□□□□ -0.65
SNX1-211ENST00000560829 PMP2P02689 132 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 RLN1P04808 185 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 IFNA6P05013 189 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 FUT3P21217 361 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 BMP5P22003 454 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 ID4P47928 161 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 NKPD1Q17RQ9 610 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 MPV17LQ2QL34 196 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 ALKBH6Q3KRA9 238 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 SCGB2B2Q4G0G5 96 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 ATPAF1Q5TC12 328 aaPredicted RBP11.02□□□□□ -0.65
SNX1-211ENST00000560829 LINC00596Q86U02 117 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 OR8G5Q8NG78 346 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 CCDC107Q8WV48 283 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 DACT3Q96B18 629 aaPredicted RBP11.02□□□□□ -0.65
SNX1-211ENST00000560829 MUCL1Q96DR8 90 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 DMRTB1Q96MA1 342 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 ELOVL5Q9NYP7 299 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 JKAMPQ9P055 326 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 RCC2Q9P258 522 aaKnown RBP11.02□□□□□ -0.65
SNX1-211ENST00000560829 AK3Q9UIJ7 227 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 NPTNQ9Y639 398 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 ATMQ13315 3056 aa11.02□□□□□ -0.65
SNX1-211ENST00000560829 MEIKINA0A087WXM9 373 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 TMEM210A6NLX4 147 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 F8VVB4 439 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 F8VWA3 439 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 H3BUI4 141 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 SSNA1O43805 119 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 C1QBP02746 253 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 CSN2P05814 226 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 CXCL3P19876 107 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 AMY2BP19961 511 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 KLRB1Q12918 225 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 ZNF718Q3SXZ3 478 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 WDR86Q86TI4 376 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 SPICQ8N5J4 248 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 OR5AP2Q8NGF4 316 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 OR5H2Q8NGV7 314 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 ADAT1Q9BUB4 502 aaKnown RBP11.01□□□□□ -0.65
SNX1-211ENST00000560829 ST6GALNAC5Q9BVH7 336 aa11.01□□□□□ -0.65
SNX1-211ENST00000560829 C1QTNF9BB2RNN3 333 aa11□□□□□ -0.65
SNX1-211ENST00000560829 EEF1E1-BLOC1S5C9J1V9 151 aa11□□□□□ -0.65
SNX1-211ENST00000560829 OR7C1O76099 320 aaPredicted RBP11□□□□□ -0.65
SNX1-211ENST00000560829 C1QTNF9P0C862 333 aa11□□□□□ -0.65
SNX1-211ENST00000560829 ANXA3P12429 323 aa11□□□□□ -0.65
SNX1-211ENST00000560829 FAM27E3Q08E93 113 aa11□□□□□ -0.65
SNX1-211ENST00000560829 IL13RA2Q14627 380 aa11□□□□□ -0.65
SNX1-211ENST00000560829 OVCH2Q7RTZ1 564 aa11□□□□□ -0.65
SNX1-211ENST00000560829 NOXA1Q86UR1 476 aa11□□□□□ -0.65
SNX1-211ENST00000560829 LHFPL1Q86WI0 220 aa11□□□□□ -0.65
SNX1-211ENST00000560829 TERB2Q8NHR7 220 aa11□□□□□ -0.65
SNX1-211ENST00000560829 RADILQ96JH8 1075 aa11□□□□□ -0.65
SNX1-211ENST00000560829 CMSS1Q9BQ75 279 aaKnown RBP11□□□□□ -0.65
SNX1-211ENST00000560829 TMEM100Q9NV29 134 aa11□□□□□ -0.65
SNX1-211ENST00000560829 ZNF230Q9UIE0 474 aaPredicted RBP11□□□□□ -0.65
SNX1-211ENST00000560829 VSIG4Q9Y279 399 aa11□□□□□ -0.65
SNX1-211ENST00000560829 POLDIP2Q9Y2S7 368 aa11□□□□□ -0.65
SNX1-211ENST00000560829 PTPRQQ9UMZ3 2332 aa11□□□□□ -0.65
SNX1-211ENST00000560829 UBE2QL1A1L167 161 aa11□□□□□ -0.65
SNX1-211ENST00000560829 OR2AT4A6NND4 320 aa11□□□□□ -0.65
SNX1-211ENST00000560829 FCGR3AP08637 254 aa11□□□□□ -0.65
SNX1-211ENST00000560829 ACAA1P09110 424 aaPredicted RBP11□□□□□ -0.65
SNX1-211ENST00000560829 CCKARP32238 428 aa11□□□□□ -0.65
SNX1-211ENST00000560829 GZMKP49863 264 aa11□□□□□ -0.65
SNX1-211ENST00000560829 ZNF83P51522 516 aa11□□□□□ -0.65
SNX1-211ENST00000560829 NKX2-5P52952 324 aaPredicted RBP11□□□□□ -0.65
SNX1-211ENST00000560829 ERVK11-1P61568 191 aa11□□□□□ -0.65
SNX1-211ENST00000560829 MRPS15P82914 257 aaKnown RBP11□□□□□ -0.65
SNX1-211ENST00000560829 KCNJ8Q15842 424 aa11□□□□□ -0.65
SNX1-211ENST00000560829 TMEM211Q6ICI0 200 aa11□□□□□ -0.65
SNX1-211ENST00000560829 HS3ST6Q96QI5 342 aa11□□□□□ -0.65
SNX1-211ENST00000560829 VKORC1Q9BQB6 163 aa11□□□□□ -0.65
SNX1-211ENST00000560829 HDHD3Q9BSH5 251 aaPredicted RBP11□□□□□ -0.65
SNX1-211ENST00000560829 ZNF701Q9NV72 531 aaPredicted RBP11□□□□□ -0.65
SNX1-211ENST00000560829 ZNF69Q9UC07 566 aa11□□□□□ -0.65
SNX1-211ENST00000560829 OR4E1P0C645 316 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 GCH1P30793 250 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 OR3A3P47888 321 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 ZNF154Q13106 437 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 CDK10Q15131 360 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms