RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SPSB1Q96BD6 273 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 SDSLQ96GA7 329 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 TMEM80Q96HE8 168 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 OPALINQ96PE5 141 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 SPACA5Q96QH8 159 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 ZNF222Q9UK12 451 aa10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 CAB39Q9Y376 341 aaPredicted RBP10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 EXOSC1Q9Y3B2 195 aaKnown RBP10.69□□□□□ -0.7
CTDSPL2-209ENST00000560620 IGKV1-9A0A0C4DH69 117 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 A0A1W2PPH5 198 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 A0A1W2PRD5 423 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 A0A1W2PRF3 423 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 A0A1W2PRM7 423 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 H0YHG0 523 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 SPRY1O43609 319 aaPredicted RBP10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 CALCBP10092 127 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 PIPP12273 146 aaPredicted RBP10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 EEF1B2P24534 225 aaKnown RBP10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 SOX2P48431 317 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 ERVK11-1P61568 191 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 RPL31P62899 125 aaKnown RBP10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 SLC34A1Q06495 639 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 Q8IYB0 196 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 STX19Q8N4C7 294 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 KIR3DL3Q8N743 410 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 BPIFB6Q8NFQ5 453 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 OR4M1Q8NGD0 313 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 OR5D18Q8NGL1 313 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 C8orf46Q8TAG6 207 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 ZNF649Q9BS31 505 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 ZCCHC4Q9H5U6 513 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 HES4Q9HCC6 221 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 NKX1-2Q9UD57 310 aaPredicted RBP10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 DIMT1Q9UNQ2 313 aaKnown RBP10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 FAM96BQ9Y3D0 163 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 HSPE1-MOB4S4R3N1 261 aa10.68□□□□□ -0.7
CTDSPL2-209ENST00000560620 TRBV23-1A0A0A0MS06 115 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 EFCAB10A6NFE3 127 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 F8VVB4 439 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 F8VWA3 439 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 MAGEB3O15480 346 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 HOXA3O43365 443 aaPredicted RBP10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 SULT1B1O43704 296 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 ANGPTL7O43827 346 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 XPNPEP2O43895 674 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 TK1P04183 234 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 CD2P06729 351 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 CHRM2P08172 466 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 PRKACAP17612 351 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 BCL3P20749 454 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 DLX1P56177 255 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 EDDM3BP56851 147 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 GUCA2AQ02747 115 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 COL10A1Q03692 680 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 ST3GAL4Q11206 333 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 CCDC58Q4VC31 144 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 XAF1Q6GPH4 301 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 RPL22L1Q6P5R6 122 aaKnown RBP10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 GDPD3Q7L5L3 318 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 SATL1Q86VE3 508 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 FAM58AQ8N1B3 248 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 GPR148Q8TDV2 347 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 DMRTB1Q96MA1 342 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 JAM3Q9BX67 310 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 METTL8Q9H825 291 aaKnown RBP10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 ZMAT3Q9HA38 289 aaKnown RBP10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 C19orf12Q9NSK7 152 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 RBFOX1Q9NWB1 397 aaKnown RBP10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 BABAM2Q9NXR7 383 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 CLEC2DQ9UHP7 191 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 GLS2Q9UI32 602 aa10.67□□□□□ -0.7
CTDSPL2-209ENST00000560620 hCG_1809904A0A1W2PP81 198 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 A0A1W2PPE2 198 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 A0A1W2PR64 198 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 A0A1W2PRV1 198 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 M0R1W7 72 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 TMEM225BP0DP42 221 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 RAB3AP20336 220 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 GABRR1P24046 479 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 DUSP1P28562 367 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 NPBWR2P48146 333 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 PDZK1IP1Q13113 114 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 KLRD1Q13241 179 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 CDK5R1Q15078 307 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 SLC9A3R2Q15599 337 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 AHSA2Q719I0 299 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 ZSCAN4Q8NAM6 433 aaPredicted RBP10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 OR5D13Q8NGL4 314 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 TBC1D15Q8TC07 691 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 GGHQ92820 318 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 CPNE2Q96FN4 548 aaPredicted RBP10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 GPER1Q99527 375 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 NOX4Q9NPH5 578 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 GSTK1Q9Y2Q3 226 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 PCDHGB5Q9Y5G0 923 aa10.66□□□□□ -0.7
CTDSPL2-209ENST00000560620 A0A0U1RQK1 487 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 PNMA8CA0A1B0GUJ8 204 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 MEX3AA1L020 520 aaKnown RBP10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 MYL12BO14950 172 aa10.65□□□□□ -0.7
CTDSPL2-209ENST00000560620 HAND1O96004 215 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms