RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ZNF684Q5T5D7 378 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 CLEC7AQ9BXN2 247 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 PALMDQ9NP74 551 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 SLC22A13Q9Y226 551 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 SESN1Q9Y6P5 492 aa14.19□□□□□ -0.14
TSPAN3-208ENST00000560514 TENM2Q9NT68 2774 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 IGHV2-26A0A0B4J1V2 119 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 H3BN98 237 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 OR2F2O95006 317 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 RAB25P57735 213 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 RPL23AP62750 156 aaKnown RBP14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 C8orf86Q6ZUL3 223 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 ADGRG5Q8IZF4 528 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 BATF2Q8N1L9 274 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 OTOSQ8NHW6 89 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 TEX12Q9BXU0 123 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 ZNF556Q9HAH1 456 aa14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 PAPOLBQ9NRJ5 636 aaKnown RBP14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 LSM4Q9Y4Z0 139 aaKnown RBP14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 EPPK1P58107 5090 aaKnown RBP14.18□□□□□ -0.14
TSPAN3-208ENST00000560514 hADV38S2A0JD32 116 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 ACOD1A6NK06 481 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 SH2D7A6NKC9 451 aaPredicted RBP14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 PRR23D1E9PI22 279 aaPredicted RBP14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 M0QZK8 103 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 GNGT2O14610 69 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 PRODHO43272 600 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 NOS1APO75052 506 aaPredicted RBP14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 PRR23D2P0DMB1 279 aaPredicted RBP14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 OSMP13725 252 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 ANXA8P13928 327 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 ATP6V1B1P15313 513 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 CDK5Q00535 292 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 GINS1Q14691 196 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 SLC35D3Q5M8T2 416 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 NKAPLQ5M9Q1 402 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 PLBD1Q6P4A8 553 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 KRT74Q7RTS7 529 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 ZNF329Q86UD4 541 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 CANT1Q8WVQ1 401 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 RBM14Q96PK6 669 aaKnown RBP14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 NRIP2Q9BQI9 281 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 THTPAQ9BU02 230 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 MED20Q9H944 212 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 ZFP57Q9NU63 452 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 ENPP5Q9UJA9 477 aa14.17□□□□□ -0.14
TSPAN3-208ENST00000560514 A0A0U1RQV5 110 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 FAM183AA6NL82 134 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 NRASP01111 189 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 MEF2CQ06413 473 aaPredicted RBP14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 EDDM3AQ14507 147 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 LCN1P1Q5VSP4 162 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 OR2W3Q7Z3T1 314 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 KRT77Q7Z794 578 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 KLHL30-AS1Q8NEE0 82 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 PRR25Q96S07 402 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 OR51V1Q9H2C8 321 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 TMEM133Q9H2Q1 129 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 DPM3Q9P2X0 92 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 PIGLQ9Y2B2 252 aa14.16□□□□□ -0.14
TSPAN3-208ENST00000560514 STAB2Q8WWQ8 2551 aa14.15□□□□□ -0.14
TSPAN3-208ENST00000560514 LYL1P12980 280 aa14.15□□□□□ -0.14
TSPAN3-208ENST00000560514 SNAPC1Q16533 368 aa14.15□□□□□ -0.14
TSPAN3-208ENST00000560514 DEGS2Q6QHC5 323 aa14.15□□□□□ -0.14
TSPAN3-208ENST00000560514 IQCF1Q8N6M8 205 aa14.15□□□□□ -0.14
TSPAN3-208ENST00000560514 DNAJC9Q8WXX5 260 aa14.15□□□□□ -0.14
TSPAN3-208ENST00000560514 NRBF2Q96F24 287 aa14.15□□□□□ -0.14
TSPAN3-208ENST00000560514 LCE6AA0A183 80 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 PSMD9O00233 223 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 ECI1P42126 302 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 ASRGL1Q7L266 308 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 TMEM179BQ7Z7N9 219 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 TRAPPC6BQ86SZ2 158 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 OR8H2Q8N162 312 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 ZNF596Q8TC21 504 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 CHPT1Q8WUD6 406 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 CCDC124Q96CT7 223 aaKnown RBP14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 HES4Q9HCC6 221 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 GPR84Q9NQS5 396 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 DNAJB9Q9UBS3 223 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 LINC00312Q9Y6C7 94 aa14.14□□□□□ -0.15
TSPAN3-208ENST00000560514 DYNC2H1Q8NCM8 4307 aaKnown RBP14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 TMEM269A0A1B0GVZ9 245 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 LEUTXA8MZ59 168 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 SELENOFO60613 162 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 E2F6O75461 281 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 ALOX5APP20292 161 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 CHATP28329 748 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 CEACAM3P40198 252 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 OR3A4PP47883 348 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 ESRRGP62508 458 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 DNAL1Q4LDG9 190 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 C9orf66Q5T8R8 295 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 OR52W1Q6IF63 320 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 C18orf65Q6ZTR6 163 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 TRPM8Q7Z2W7 1104 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 CPOQ8IVL8 374 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 OR4P4Q8NGL7 312 aa14.13□□□□□ -0.15
TSPAN3-208ENST00000560514 OR51E1Q8TCB6 317 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms