RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 RPSAP08865 295 aaKnown RBP10.24□□□□□ -0.77
SNX1-209ENST00000559961 ZNF728P0DKX0 622 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 PRKACBP22694 351 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 GABRR1P24046 479 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 MPZP25189 248 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 CEBPDP49716 269 aaPredicted RBP10.24□□□□□ -0.77
SNX1-209ENST00000559961 RBP2P50120 134 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 ARHGDIBP52566 201 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 ACTC1P68032 377 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 ACTA1P68133 377 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 MEF2CQ06413 473 aaPredicted RBP10.24□□□□□ -0.77
SNX1-209ENST00000559961 BNIP1Q12981 228 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 FAM189A2Q15884 450 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 TMEM244Q5VVB8 128 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 ZNF782Q6ZMW2 699 aaPredicted RBP10.24□□□□□ -0.77
SNX1-209ENST00000559961 AMIGO2Q86SJ2 522 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 CATSPERDQ86XM0 798 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 C10orf67Q8IYJ2 551 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 RPS4Y2Q8TD47 263 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 TRUB1Q8WWH5 349 aaKnown RBP10.24□□□□□ -0.77
SNX1-209ENST00000559961 EMG1Q92979 244 aaKnown RBP10.24□□□□□ -0.77
SNX1-209ENST00000559961 MALSU1Q96EH3 234 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 SNX22Q96L94 193 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 ZNF714Q96N38 554 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 CDCA4Q9BXL8 241 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 GABARAPL1Q9H0R8 117 aa10.24□□□□□ -0.77
SNX1-209ENST00000559961 TBL2Q9Y4P3 447 aaKnown RBP10.24□□□□□ -0.77
SNX1-209ENST00000559961 DAPL1A0PJW8 107 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 PRR32B1ATL7 298 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 H3BSH0 61 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 SRSF10O75494 262 aaKnown RBP10.23□□□□□ -0.77
SNX1-209ENST00000559961 VSIG10L2P0DP72 767 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 CCL3L1P16619 93 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 CCL1P22362 96 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 MTCP1P56278 107 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 KRTAP10-3P60369 221 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 EDDM3AQ14507 147 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 SLC25A26Q70HW3 274 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 TRAPPC6BQ86SZ2 158 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 SLAMF9Q96A28 289 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 CIB1Q99828 191 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 HES4Q9HCC6 221 aa10.23□□□□□ -0.77
SNX1-209ENST00000559961 F2RL2O00254 374 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 SH2D1BO14796 132 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 EPHA2P29317 976 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 POU3F4P49335 361 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 BMXP51813 675 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 EFNB1P98172 346 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 EMX1Q04741 257 aaPredicted RBP10.22□□□□□ -0.77
SNX1-209ENST00000559961 IL18R1Q13478 541 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 GRK1Q15835 563 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 SSX2Q16385 188 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 PLA1AQ53H76 456 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 MEDAGQ5VYS4 303 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 LHFPL2Q6ZUX7 228 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 OR8H2Q8N162 312 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 KLHDC1Q8N7A1 406 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 ZNF676Q8N7Q3 588 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 DNAAF1Q8NEP3 725 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 OR4S1Q8NGB4 309 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 NDNFQ8TB73 568 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 PRSS22Q9GZN4 317 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 CHST5Q9GZS9 411 aa10.22□□□□□ -0.77
SNX1-209ENST00000559961 LOC107986453A0A1B0GWG9 222 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 SAC3D1A6NKF1 404 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 C17orf98A8MV24 154 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 APOL3O95236 402 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 HAND1O96004 215 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 HTR1AP08908 422 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 ERVK11-1P61568 191 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 SLC34A1Q06495 639 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 ZNF273Q14593 569 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 UBE2V2Q15819 145 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 TP53I3Q53FA7 332 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 OR52W1Q6IF63 320 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 HCP5Q6MZN7 132 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 Q6ZSR3 168 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 FAM58AQ8N1B3 248 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 C17orf50Q8WW18 174 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 STMN2Q93045 179 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 AKR1E2Q96JD6 320 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 GABARAPL3Q9BY60 117 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 MTCH1Q9NZJ7 389 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 OAZ3Q9UMX2 235 aa10.21□□□□□ -0.77
SNX1-209ENST00000559961 TRGV10A0A0A0MS01 117 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 VGLL3A8MV65 326 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 MGST3O14880 152 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 TSPAN15O95858 294 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 IGHV1-8P0DP01 117 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 PRKACAP17612 351 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 BRS3P32247 399 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 EFNB2P52799 333 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 ACTA2P62736 377 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 ACTG2P63267 376 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 KPNB1Q14974 876 aaKnown RBP10.2□□□□□ -0.78
SNX1-209ENST00000559961 SPIN3Q5JUX0 258 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 MINOS1Q5TGZ0 78 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 SSX6Q7RTT6 188 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 C11orf44Q8N8P7 122 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 OR11H6Q8NGC7 330 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms