RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ALDOBP05062 364 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 CHRM2P08172 466 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 T-ENOLP0DO92 83 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 CCL1P22362 96 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 AZGP1P25311 298 aaKnown RBP10.52□□□□□ -0.73
TPM1-220ENST00000559556 VDAC2P45880 294 aaPredicted RBP10.52□□□□□ -0.73
TPM1-220ENST00000559556 EDDM3BP56851 147 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 CXCR4P61073 352 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 MEF2CQ06413 473 aaPredicted RBP10.52□□□□□ -0.73
TPM1-220ENST00000559556 TMEM95Q3KNT9 176 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 MINOS1Q5TGZ0 78 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 FOXB2Q5VYV0 432 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 Q6ZS46 218 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 GDPD3Q7L5L3 318 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 ANGPTL5Q86XS5 388 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 MNTQ99583 582 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 APOL4Q9BPW4 351 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 OR52A1Q9UKL2 312 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 MINOS1-NBL1R4GNA1 71 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 MEX3AA1L020 520 aaKnown RBP10.51□□□□□ -0.73
TPM1-220ENST00000559556 A6NIN4 97 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 F8VVB4 439 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 F8VWA3 439 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 PRKYO43930 277 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 JUNBP17275 347 aaPredicted RBP10.51□□□□□ -0.73
TPM1-220ENST00000559556 CRISP1P54107 249 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 OR12D2P58182 307 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 ACTR3P61158 418 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 ACTA2P62736 377 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 BLCAPP62952 87 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 ACTG2P63267 376 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 ACTC1P68032 377 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 ACTA1P68133 377 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 CD83Q01151 205 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 ARSJQ5FYB0 599 aaPredicted RBP10.51□□□□□ -0.73
TPM1-220ENST00000559556 PLEKHG7Q6ZR37 379 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 MEPCEQ7L2J0 689 aaKnown RBP10.51□□□□□ -0.73
TPM1-220ENST00000559556 SLC35F2Q8IXU6 374 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 WFDC9Q8NEX5 89 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 TRMT10AQ8TBZ6 339 aaKnown RBP10.51□□□□□ -0.73
TPM1-220ENST00000559556 CEP19Q96LK0 163 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 OR5M11Q96RB7 305 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 OCSTAMPQ9BR26 566 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 ADGRL4Q9HBW9 690 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 PAPOLBQ9NRJ5 636 aaKnown RBP10.51□□□□□ -0.73
TPM1-220ENST00000559556 MTCH1Q9NZJ7 389 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 MRM2Q9UI43 246 aaKnown RBP10.51□□□□□ -0.73
TPM1-220ENST00000559556 SNX5Q9Y5X3 404 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 LINC00312Q9Y6C7 94 aa10.51□□□□□ -0.73
TPM1-220ENST00000559556 IGKV1-27A0A075B6S5 117 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 IGHV2-26A0A0B4J1V2 119 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 FAM90A22PA8MWA6 464 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 MAGEB4O15481 346 aaPredicted RBP10.5□□□□□ -0.73
TPM1-220ENST00000559556 CD33P20138 364 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 DYNC1I2Q13409 638 aaKnown RBP10.5□□□□□ -0.73
TPM1-220ENST00000559556 PTGES3Q15185 160 aaKnown RBP10.5□□□□□ -0.73
TPM1-220ENST00000559556 FAHD1Q6P587 224 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 C16orf82Q7Z2V1 217 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 NRBF2Q96F24 287 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 SNX22Q96L94 193 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 CADM1Q9BY67 442 aaKnown RBP10.5□□□□□ -0.73
TPM1-220ENST00000559556 PRRG3Q9BZD7 231 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 PLEKHA1Q9HB21 404 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 SEBOXQ9HB31 216 aaPredicted RBP10.5□□□□□ -0.73
TPM1-220ENST00000559556 CLN6Q9NWW5 311 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 SLC7A11Q9UPY5 501 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 HILPDAQ9Y5L2 63 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 SESN1Q9Y6P5 492 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 RYR3Q15413 4870 aa10.5□□□□□ -0.73
TPM1-220ENST00000559556 FAM230AA0A1W2PPH8 454 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 hADV38S2A0JD32 116 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 TMEM82A0PJX8 343 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 ZNF670-ZNF695F2Z2N8 137 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 M0R129 80 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 FKBP6O75344 327 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 DNAJC8O75937 253 aaPredicted RBP10.49□□□□□ -0.73
TPM1-220ENST00000559556 IGHA1P01876 353 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 IGLL1P15814 213 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 DAPP51397 102 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 EFNB1P98172 346 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 SLC34A1Q06495 639 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 UBE2V2Q15819 145 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 AADACL4Q5VUY2 407 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 NXNL2Q5VZ03 156 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 BCDIN3DQ7Z5W3 292 aaKnown RBP10.49□□□□□ -0.73
TPM1-220ENST00000559556 CATSPERDQ86XM0 798 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 ZNF676Q8N7Q3 588 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 OR5AU1Q8NGC0 362 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 NDNFQ8TB73 568 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 SLAMF9Q96A28 289 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 THTPAQ9BU02 230 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 CLEC7AQ9BXN2 247 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 CHST5Q9GZS9 411 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 TMEM133Q9H2Q1 129 aa10.49□□□□□ -0.73
TPM1-220ENST00000559556 A0A1W2PRX2 142 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 TCRBV3S1A0A5B6 114 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 GATBO75879 557 aaKnown RBP10.48□□□□□ -0.73
TPM1-220ENST00000559556 ATP5HO75947 161 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 HAND1O96004 215 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 PEX2P28328 305 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms