RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 PTHLHP12272 177 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 IFI30P13284 250 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 LCN2P80188 198 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 DEFB103AP81534 67 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 GBE1Q04446 702 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 RAB11BQ15907 218 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 PCOTHQ58A44 107 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 PLCXD3Q63HM9 321 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 MRPL21Q7Z2W9 205 aaKnown RBP1.09□□□□□ -2.23
CASC4-210ENST00000559550 CYP4Z2PQ8N1L4 340 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 C3orf22Q8N5N4 141 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 PROKR2Q8NFJ6 384 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 PIH1D2Q8WWB5 315 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 TMED9Q9BVK6 235 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 HIGD2AQ9BW72 106 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 SRRQ9GZT4 340 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 CHRNA10Q9GZZ6 450 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 TXNIPQ9H3M7 391 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 CLSTN2Q9H4D0 955 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 RBM22Q9NW64 420 aaKnown RBP eCLIP1.09□□□□□ -2.23
CASC4-210ENST00000559550 DDIT4Q9NX09 232 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 RHBDD3Q9Y3P4 386 aa1.09□□□□□ -2.23
CASC4-210ENST00000559550 ZNF706Q9Y5V0 76 aaPredicted RBP1.09□□□□□ -2.23
CASC4-210ENST00000559550 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.24
CASC4-210ENST00000559550 SBNO1A3KN83 1393 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 TENM1Q9UKZ4 2725 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 IGHV3-21A0A0B4J1V1 117 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 IGHV3-43A0A0B4J1X8 118 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 ZNF701M0R085 212 aaPredicted RBP1.08□□□□□ -2.24
CASC4-210ENST00000559550 RGS5O15539 181 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 AKR7A2O43488 359 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 LGALS7P47929 136 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 ST3GAL4Q11206 333 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 CDNFQ49AH0 187 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 CLLU1OSQ5K130 101 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 ULK3Q6PHR2 472 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 ANGPTL8Q6UXH0 198 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 Q6ZS52 159 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 OR2W3Q7Z3T1 314 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 CCNYL1Q8N7R7 359 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 ZFAND1Q8TCF1 268 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 TFGQ92734 400 aaPredicted RBP1.08□□□□□ -2.24
CASC4-210ENST00000559550 CERS2Q96G23 380 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 MYCBPQ99417 103 aaPredicted RBP1.08□□□□□ -2.24
CASC4-210ENST00000559550 ARMC7Q9H6L4 198 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 TFR2Q9UP52 801 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 INSIG2Q9Y5U4 225 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 NUP205Q92621 2012 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 DOCK6Q96HP0 2047 aa1.08□□□□□ -2.24
CASC4-210ENST00000559550 IGKV1D-37A0A075B6S9 117 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 FAM240AA0A1B0GVK7 77 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 F5H5P2 479 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 H3BMM0 161 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 K7ERS5 55 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 IGKV1-16P04430 117 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 CD9P21926 228 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 IMPA1P29218 277 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 CLDN8P56748 225 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 SSX1Q16384 188 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 FAM27D1Q5T7N8 215 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 THOC7Q6I9Y2 204 aaKnown RBP1.07□□□□□ -2.24
CASC4-210ENST00000559550 SETD3Q86TU7 594 aaPredicted RBP1.07□□□□□ -2.24
CASC4-210ENST00000559550 MSRB3Q8IXL7 192 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 ZNF567Q8N184 647 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 BPIFB6Q8NFQ5 453 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 OR8A1Q8NGG7 326 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 OR10D4PQ8NGN7 298 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 TCP10LQ8TDR4 215 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 C2orf15Q8WU43 125 aaKnown RBP1.07□□□□□ -2.24
CASC4-210ENST00000559550 APOBEC3DQ96AK3 386 aaPredicted RBP1.07□□□□□ -2.24
CASC4-210ENST00000559550 RAD51AP1Q96B01 352 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 UBE2WQ96B02 151 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 ZNF707Q96C28 371 aaPredicted RBP1.07□□□□□ -2.24
CASC4-210ENST00000559550 METTL26Q96S19 204 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 IQCGQ9H095 443 aaKnown RBP1.07□□□□□ -2.24
CASC4-210ENST00000559550 GABARAPL1Q9H0R8 117 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 ZNF780BQ9Y6R6 833 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 U3KQK5 164 aa1.07□□□□□ -2.24
CASC4-210ENST00000559550 LOC389332A0A1B0GUA5 103 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 LEUTXA8MZ59 168 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 SLC31A1O15431 190 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 RNF113AO15541 343 aaKnown RBP1.06□□□□□ -2.24
CASC4-210ENST00000559550 TRAPPC6AO75865 159 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 PRB1P04280 392 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 GZMAP12544 262 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 ZNF22P17026 224 aaPredicted RBP1.06□□□□□ -2.24
CASC4-210ENST00000559550 COILP38432 576 aaPredicted RBP1.06□□□□□ -2.24
CASC4-210ENST00000559550 PSMD4P55036 377 aaKnown RBP1.06□□□□□ -2.24
CASC4-210ENST00000559550 FOXF1Q12946 379 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 ZNF404Q494X3 552 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 HIKESHIQ53FT3 197 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 PIP5KL1Q5T9C9 394 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 LINC00596Q86U02 117 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 OR51A7Q8NH64 312 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 NDNFQ8TB73 568 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 UBA3Q8TBC4 463 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 NT5CQ8TCD5 201 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 TMEM106BQ9NUM4 274 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 MYO9BQ13459 2157 aa1.06□□□□□ -2.24
CASC4-210ENST00000559550 KMT2EQ8IZD2 1858 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms