RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 A8MXK9 166 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 TFF1P04155 84 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 CD37P11049 281 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 ZNF16P17020 682 aaPredicted RBP18.06■□□□□ 0.48
SNX1-206ENST00000559389 MYL9P24844 172 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 PITPNBP48739 271 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 ZNF788Q6ZQV5 615 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 FAM58AQ8N1B3 248 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 FAM216BQ8N7L0 139 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 OR13F1Q8NGS4 319 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 MSI2Q96DH6 328 aaKnown RBP18.06■□□□□ 0.48
SNX1-206ENST00000559389 GAFA1Q96PS6 74 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 CCL13Q99616 98 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 GFI1Q99684 422 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 CHCHD6Q9BRQ6 235 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 IL36RNQ9UBH0 155 aa18.06■□□□□ 0.48
SNX1-206ENST00000559389 MRPS28Q9Y2Q9 187 aaKnown RBP18.06■□□□□ 0.48
SNX1-206ENST00000559389 A0A1B0GW55 424 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 RFPL4AA6NLU0 287 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 KIAA1324LA8MWY0 1029 aaPredicted RBP18.05■□□□□ 0.48
SNX1-206ENST00000559389 B4DSR2 109 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 RFPL4AL1F8VTS6 287 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 TMPRSS2O15393 492 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 DUX4L2P0CJ85 424 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 DUX4L3P0CJ86 424 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 DUX4L4P0CJ87 422 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 DUX4L5P0CJ88 424 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 DUX4L6P0CJ89 424 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 DUX4L7P0CJ90 424 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 PRKACAP17612 351 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 FGF12P61328 243 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 TIMM50Q3ZCQ8 353 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 ESCO2Q56NI9 601 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 C1orf100Q5SVJ3 147 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 GLT8D1Q68CQ7 371 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 ELP2Q6IA86 826 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 DUX4L9Q6RFH8 374 aaPredicted RBP18.05■□□□□ 0.48
SNX1-206ENST00000559389 ZNF841Q6ZN19 808 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 SLC36A1Q7Z2H8 476 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 BIVMQ86UB2 503 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 LINC01356Q8N9X3 169 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 Q8NFD4 153 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 OR4D6Q8NGJ1 314 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 FOXRED1Q96CU9 486 aaPredicted RBP18.05■□□□□ 0.48
SNX1-206ENST00000559389 SMR3AQ99954 134 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 SSBP3Q9BWW4 388 aaPredicted RBP18.05■□□□□ 0.48
SNX1-206ENST00000559389 DUX4Q9UBX2 424 aa18.05■□□□□ 0.48
SNX1-206ENST00000559389 SIGLEC5O15389 551 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 CD5LO43866 347 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 FCN3O75636 299 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 CDRT1O95170 752 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 MSMBP08118 114 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 ALDH3B2P48448 385 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 MTNR1BP49286 362 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 CEBPDP49716 269 aaPredicted RBP18.04■□□□□ 0.48
SNX1-206ENST00000559389 SPIN3Q5JUX0 258 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 CYB5R2Q6BCY4 276 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 AWAT2Q6E213 333 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 FIP1L1Q6UN15 594 aaKnown RBP18.04■□□□□ 0.48
SNX1-206ENST00000559389 CD177Q8N6Q3 437 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 SDSLQ96GA7 329 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 C1orf147Q96MC9 270 aaPredicted RBP18.04■□□□□ 0.48
SNX1-206ENST00000559389 ELL3Q9HB65 397 aaPredicted RBP18.04■□□□□ 0.48
SNX1-206ENST00000559389 GSTK1Q9Y2Q3 226 aa18.04■□□□□ 0.48
SNX1-206ENST00000559389 AK6Q9Y3D8 172 aaKnown RBP18.04■□□□□ 0.48
SNX1-206ENST00000559389 LOC100506127A0A0U1RQW1 187 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 FOXH1O75593 365 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 TFAP2AP05549 437 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 CALCBP10092 127 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 SELLP14151 372 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 GABRA2P47869 451 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 BMXP51813 675 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 GNB2P62879 340 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 IL13RA1P78552 427 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 ZNF146Q15072 292 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 RSU1Q15404 277 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 WDR25Q64LD2 544 aaPredicted RBP18.03■□□□□ 0.48
SNX1-206ENST00000559389 OR6M1Q8NGM8 313 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 OR10K1Q8NGX5 313 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 TBC1D15Q8TC07 691 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 METTL9Q9H1A3 318 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 SEBOXQ9HB31 216 aaPredicted RBP18.03■□□□□ 0.48
SNX1-206ENST00000559389 LPAR2Q9HBW0 351 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 CLN8Q9UBY8 286 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 OR14J1Q9UGF5 321 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 ING4Q9UNL4 249 aa18.03■□□□□ 0.48
SNX1-206ENST00000559389 DVL1O14640 695 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 PDCD5O14737 125 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 SLC22A1O15245 554 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 PHF1O43189 567 aaPredicted RBP18.02■□□□□ 0.48
SNX1-206ENST00000559389 ZFP36P26651 326 aaKnown RBP18.02■□□□□ 0.48
SNX1-206ENST00000559389 PRDX2P32119 198 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 NPY4RP50391 375 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 DGUOKQ16854 277 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 GLIPR1L1Q6UWM5 242 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 GDPGP1Q6ZNW5 385 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 MED30Q96HR3 178 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 S100A13Q99584 98 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 CENPOQ9BU64 300 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 METRNQ9UJH8 293 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms