RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 TPGS1Q6ZTW0 290 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 MARCH3Q86UD3 253 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 TMEM25Q86YD3 366 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 BOD1L2Q8IYS8 172 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 ORMDL3Q8N138 153 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 CYP4Z2PQ8N1L4 340 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 MIR7-3HGQ8N6C7 128 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 SLC35G3Q8N808 338 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 SPANXA2-OT1Q8N9U9 137 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 OR8G5Q8NG78 346 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 OR5M1Q8NGP8 315 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 OR2Y1Q8NGV0 311 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 OR51Q1Q8NH59 317 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 FAM57AQ8TBR7 257 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 BLNKQ8WV28 456 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 CCL17Q92583 94 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 ZMYND19Q96E35 227 aaPredicted RBP0.93□□□□□ -2.26
USP3-209ENST00000558925 YIPF6Q96EC8 236 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 SERPINB11Q96P15 392 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 QKIQ96PU8 341 aaKnown RBP eCLIP0.93□□□□□ -2.26
USP3-209ENST00000558925 LINC01587Q99440 93 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 VAT1Q99536 393 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 SPIN2AQ99865 258 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 CTRCQ99895 268 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 SPIN2BQ9BPZ2 258 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 RHOXF2Q9BQY4 288 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 TBL1XR1Q9BZK7 514 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 ZNF436Q9C0F3 470 aaPredicted RBP0.93□□□□□ -2.26
USP3-209ENST00000558925 FBXL15Q9H469 300 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 PRORYQ9H606 182 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 METTL17Q9H7H0 456 aaPredicted RBP0.93□□□□□ -2.26
USP3-209ENST00000558925 NLE1Q9NVX2 485 aaPredicted RBP0.93□□□□□ -2.26
USP3-209ENST00000558925 TAS2R13Q9NYV9 303 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 CHMP5Q9NZZ3 219 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 PRO0461Q9UI25 63 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 PRO0628Q9UI54 55 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 RWDD2AQ9UIY3 292 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 SCML1Q9UN30 329 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 SLC7A11Q9UPY5 501 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 SNX24Q9Y343 169 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 S4R3C0 116 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 PLXNB3Q9ULL4 1909 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 PRR14LQ5THK1 2151 aa0.93□□□□□ -2.26
USP3-209ENST00000558925 AHDC1Q5TGY3 1603 aaPredicted RBP0.93□□□□□ -2.26
USP3-209ENST00000558925 PLA2R1Q13018 1463 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 TICRRQ7Z2Z1 1910 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 IGLV4-60A0A075B6I1 120 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 LOC389332A0A1B0GUA5 103 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 TRPC5OSA6NMA1 111 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 OR2AT4A6NND4 320 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 C16orf90A8MZG2 172 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 CENPBD1B2RD01 187 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 RNASEK-C17orf49H0YIS7 233 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 PLPP3O14495 311 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 FFAR1O14842 300 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 SGCEO43556 437 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 OR7C2O60412 319 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 SCN2BO60939 215 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 OR2A4O95047 310 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 LHBP01229 141 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 MAS1P04201 325 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 TEAD1P28347 426 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 GCLMP48507 274 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 DNASE1L1P49184 302 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 RAB38P57729 211 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 VSNL1P62760 191 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 RBX1P62877 108 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 DYNLL1P63167 89 aaKnown RBP0.92□□□□□ -2.26
USP3-209ENST00000558925 PRKCDQ05655 676 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 FAM53BQ14153 422 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 ANGPT1Q15389 498 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 TRIP13Q15645 432 aaPredicted RBP0.92□□□□□ -2.26
USP3-209ENST00000558925 TOMM34Q15785 309 aaPredicted RBP0.92□□□□□ -2.26
USP3-209ENST00000558925 BSXQ3C1V8 233 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 CEACAM21Q3KPI0 293 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 LINC00303Q3SY05 128 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 FBXL19-AS1Q494R0 122 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 ZNF404Q494X3 552 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 Q499Y3 187 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 IDNKQ5T6J7 187 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 KPRPQ5T749 579 aaPredicted RBP0.92□□□□□ -2.26
USP3-209ENST00000558925 FAM222AQ5U5X8 452 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 KCTD16Q68DU8 428 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 HBMQ6B0K9 141 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 MED27Q6P2C8 311 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 MORN3Q6PF18 240 aaPredicted RBP0.92□□□□□ -2.26
USP3-209ENST00000558925 SLC25A34Q6PIV7 304 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 FAM231DQ6ZW35 169 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 SSX6Q7RTT6 188 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 DAZ4Q86SG3 579 aaKnown RBP0.92□□□□□ -2.26
USP3-209ENST00000558925 GALNT10Q86SR1 603 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 SPICQ8N5J4 248 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 OTUD6BQ8N6M0 293 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 ZDHHC22Q8N966 263 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 GATD1Q8NB37 220 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 ST20-AS1Q8NBB2 130 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 ZNF555Q8NEP9 628 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 OR4K17Q8NGC6 315 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 OR9A2Q8NGT5 310 aa0.92□□□□□ -2.26
USP3-209ENST00000558925 ACTL9Q8TC94 416 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms