RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 RASL12Q9NYN1 266 aa8.08□□□□□ -1.12
CUX1-216ENST00000558469 PPIAL4EA0A075B759 164 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 IGHV3OR15-7A0A075B7D8 119 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 A0A1W2PP11 408 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 CLDN25C9JDP6 229 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 PPIAL4DF5H284 164 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 PPIHO43447 177 aaKnown RBP8.07□□□□□ -1.12
CUX1-216ENST00000558469 ZNF780AO75290 641 aaPredicted RBP8.07□□□□□ -1.12
CUX1-216ENST00000558469 RP2O75695 350 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 PAHP00439 452 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 PPIAL4FP0DN26 164 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 VSIG8P0DPA2 414 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 PRKACAP17612 351 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 RANBP1P43487 201 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 CAPZA1P52907 286 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 SNU13P55769 128 aaKnown RBP8.07□□□□□ -1.12
CUX1-216ENST00000558469 DGUOKQ16854 277 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 ELP2Q6IA86 826 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 OR10K2Q6IF99 312 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 ACP7Q6ZNF0 438 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 PEG10Q86TG7 708 aaKnown RBP8.07□□□□□ -1.12
CUX1-216ENST00000558469 CDH24Q86UP0 819 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 FAM58AQ8N1B3 248 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 TMEM104Q8NE00 496 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 DEFB108BQ8NET1 73 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 OR5T2Q8NGG2 359 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 KCNG3Q8TAE7 436 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 NINJ1Q92982 152 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 CST11Q9H112 138 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 BANF2Q9H503 90 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 CHODLQ9H9P2 273 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 RHOFQ9HBH0 211 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 HES4Q9HCC6 221 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 MYOZ1Q9NP98 299 aaPredicted RBP8.07□□□□□ -1.12
CUX1-216ENST00000558469 IL36GQ9NZH8 169 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 CCDC59Q9P031 241 aaKnown RBP8.07□□□□□ -1.12
CUX1-216ENST00000558469 IL36RNQ9UBH0 155 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 DNAJB11Q9UBS4 358 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 GHRLQ9UBU3 117 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 OR5V1Q9UGF6 321 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 PPIAL4AQ9Y536 164 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 NPTNQ9Y639 398 aa8.07□□□□□ -1.12
CUX1-216ENST00000558469 MAP1AP78559 2803 aaPredicted RBP8.06□□□□□ -1.12
CUX1-216ENST00000558469 TMEM272A0A1B0GTI8 110 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 OOEPA6NGQ2 149 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 TMEM14DPA8MWL7 114 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.06□□□□□ -1.12
CUX1-216ENST00000558469 TMEM127O75204 238 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 MPIG6BO95866 241 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 GTF2F2P13984 249 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 MGMTP16455 207 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 SMCPP49901 116 aaPredicted RBP8.06□□□□□ -1.12
CUX1-216ENST00000558469 PDLIM4P50479 330 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 BMXP51813 675 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 EFNB2P52799 333 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 TMEM33P57088 247 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 BTG1P62324 171 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 QRFPP83859 136 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 PLA2G7Q13093 441 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 UNC119Q13432 240 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 ZMYND11Q15326 602 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 MICBQ29980 383 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 CNPY1Q3B7I2 92 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 SMIM21Q3B7S5 101 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 PIGYQ3MUY2 71 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 AVPI1Q5T686 147 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 FIP1L1Q6UN15 594 aaKnown RBP8.06□□□□□ -1.12
CUX1-216ENST00000558469 LRRC75A-AS1Q8N1F1 130 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 OSR2Q8N2R0 312 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 OR5H6Q8NGV6 325 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 LGALS14Q8TCE9 139 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 FAM168AQ92567 244 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 AP3S1Q92572 193 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 RAB1CQ92928 201 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 MBD6Q96DN6 1003 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 TIMD4Q96H15 378 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 GAL3ST1Q99999 423 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 MRI1Q9BV20 369 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 SELENOIQ9C0D9 397 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 HMG20AQ9NP66 347 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 ABRACLQ9P1F3 81 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 NLKQ9UBE8 527 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 COMMD3Q9UBI1 195 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 OR14J1Q9UGF5 321 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 ST3GAL6Q9Y274 331 aa8.06□□□□□ -1.12
CUX1-216ENST00000558469 ASH1LQ9NR48 2969 aaKnown RBP8.06□□□□□ -1.12
CUX1-216ENST00000558469 YLPM1P49750 1951 aaKnown RBP8.05□□□□□ -1.12
CUX1-216ENST00000558469 TRAV38-1A0A0B4J264 116 aa8.05□□□□□ -1.12
CUX1-216ENST00000558469 ISPDA4D126 451 aa8.05□□□□□ -1.12
CUX1-216ENST00000558469 OR2AT4A6NND4 320 aa8.05□□□□□ -1.12
CUX1-216ENST00000558469 LGALS8O00214 317 aa8.05□□□□□ -1.12
CUX1-216ENST00000558469 LDLRAD4O15165 306 aa8.05□□□□□ -1.12
CUX1-216ENST00000558469 IGHV2-70P01814 119 aa8.05□□□□□ -1.12
CUX1-216ENST00000558469 GYPAP02724 150 aa8.05□□□□□ -1.12
CUX1-216ENST00000558469 TFF1P04155 84 aa8.05□□□□□ -1.12
CUX1-216ENST00000558469 MUC1P15941 1255 aaPredicted RBP8.05□□□□□ -1.12
CUX1-216ENST00000558469 GIFP27352 417 aa8.05□□□□□ -1.12
CUX1-216ENST00000558469 DUSP1P28562 367 aa8.05□□□□□ -1.12
CUX1-216ENST00000558469 GPR6P46095 362 aaPredicted RBP8.05□□□□□ -1.12
CUX1-216ENST00000558469 CEBPDP49716 269 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms