RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 NPIPB13A6NJU9 1138 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 NPIPB4C9JG80 1138 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 SOX1O00570 391 aaPredicted RBP9.8□□□□□ -0.84
PCAT29-201ENST00000558411 CLPSP04118 112 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 PFN1P07737 140 aaKnown RBP9.8□□□□□ -0.84
PCAT29-201ENST00000558411 CCL1P22362 96 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 POLR2HP52434 150 aaKnown RBP9.8□□□□□ -0.84
PCAT29-201ENST00000558411 FAM3BP58499 235 aaPredicted RBP9.8□□□□□ -0.84
PCAT29-201ENST00000558411 RAB11AP62491 216 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 RPS21P63220 83 aaKnown RBP9.8□□□□□ -0.84
PCAT29-201ENST00000558411 BAXQ07812 192 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 PRDX4Q13162 271 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 ZNF774Q6NX45 483 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 CMTM1Q8IZ96 169 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 H1FOOQ8IZA3 346 aaPredicted RBP9.8□□□□□ -0.84
PCAT29-201ENST00000558411 ZNF248Q8NDW4 579 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 OR10G6Q8NH81 332 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 NPRL2Q8WTW4 380 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 ASB10Q8WXI3 467 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 ZNF385AQ96PM9 386 aaKnown RBP9.8□□□□□ -0.84
PCAT29-201ENST00000558411 KLHDC3Q9BQ90 382 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 CALHM2Q9HA72 323 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 FGF22Q9HCT0 170 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 PRTFDC1Q9NRG1 225 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 PRSS38A1L453 326 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 DHRS7CA6NNS2 312 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 SOX15O60248 233 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 GP1BBP13224 206 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 PGCP20142 388 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 DAP3P51398 398 aaKnown RBP9.8□□□□□ -0.84
PCAT29-201ENST00000558411 MTCP1P56278 107 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 ZP4Q12836 540 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 GAB4Q2WGN9 574 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 ACOT6Q3I5F7 207 aaPredicted RBP9.8□□□□□ -0.84
PCAT29-201ENST00000558411 SP6Q3SY56 376 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 SLC38A9Q8NBW4 561 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 DTD1Q8TEA8 209 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 FGF14Q92915 247 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 LRRC3BQ96PB8 259 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 KCNK17Q96T54 332 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 TPSD1Q9BZJ3 242 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 VN1R1Q9GZP7 353 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 WNT5BQ9H1J7 359 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 GPR173Q9NS66 373 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 LYRM2Q9NU23 88 aaPredicted RBP9.8□□□□□ -0.84
PCAT29-201ENST00000558411 NECAP2Q9NVZ3 263 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 IL17BQ9UHF5 180 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 CLDN16Q9Y5I7 305 aa9.8□□□□□ -0.84
PCAT29-201ENST00000558411 IGKV1D-8A0A087WSZ0 117 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 TMED7-TICAM2A0A0A6YYA0 188 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 A0A0J9YY10 115 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 LNP1A1A4G5 178 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 FAM24AA6NFZ4 105 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 HCRTR2O43614 444 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 AHSA1O95433 338 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 BCL2P10415 239 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 MMP9P14780 707 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 OR10J1P30954 320 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 ZNF133P52736 654 aaPredicted RBP9.79□□□□□ -0.84
PCAT29-201ENST00000558411 SRPXP78539 464 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 CST6Q15828 149 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 ZNF880Q6PDB4 577 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 RTL10Q7L3V2 364 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 SPRED2Q7Z698 418 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 CENPVQ7Z7K6 275 aaPredicted RBP9.79□□□□□ -0.84
PCAT29-201ENST00000558411 MRPL41Q8IXM3 137 aaKnown RBP9.79□□□□□ -0.84
PCAT29-201ENST00000558411 FAM185AQ8N0U4 392 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 TSLPQ969D9 159 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 CYYR1Q96J86 154 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 ASCL3Q9NQ33 180 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 FKBP11Q9NYL4 201 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 SLC7A11Q9UPY5 501 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 GAB2Q9UQC2 676 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 B4E171 279 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 PVRP15151 417 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 TSPAN7P41732 249 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 FMODQ06828 376 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 COTL1Q14019 142 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 POMZP3Q6PJE2 187 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 OGFOD3Q6PK18 319 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 ZNF66Q6ZN08 573 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 DOK3Q7L591 496 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 DEFB128Q7Z7B8 93 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 TMEM252Q8N6L7 170 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 OR10S1Q8NGN2 331 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 TMEM171Q8WVE6 324 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 AGMATQ9BSE5 352 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 THAP10Q9P2Z0 257 aaPredicted RBP9.79□□□□□ -0.84
PCAT29-201ENST00000558411 RFNGQ9Y644 331 aa9.79□□□□□ -0.84
PCAT29-201ENST00000558411 A0A1W2PQD3 144 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 NPIPA5E9PKD4 350 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 ADH1BP00325 375 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 GJA4P35212 333 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 ASCL1P50553 236 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 UCP3P55916 312 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 TAS2R30P59541 319 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 P2RY6Q15077 328 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 ACSF3Q4G176 576 aaPredicted RBP9.78□□□□□ -0.84
PCAT29-201ENST00000558411 ACTL10Q5JWF8 245 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms