RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 MDKP21741 143 aaPredicted RBP12.46□□□□□ -0.41
SPG11-210ENST00000558319 LSRQ86X29 649 aaPredicted RBP12.46□□□□□ -0.41
SPG11-210ENST00000558319 OXGR1Q96P68 337 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 OR4C12Q96R67 309 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 TRGV5A0A0B4J1U4 118 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 SFT2D2O95562 160 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 HOXB3P14651 431 aaPredicted RBP12.46□□□□□ -0.42
SPG11-210ENST00000558319 RPS23P62266 143 aaKnown RBP12.46□□□□□ -0.42
SPG11-210ENST00000558319 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.424e-7■■■■■ 30.9
SPG11-210ENST00000558319 LYRM7Q5U5X0 104 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 LYG1Q8N1E2 194 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 OR10G4Q8NGN3 311 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 OR10G9Q8NGN4 311 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 OR10G7Q8NGN6 311 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 SARAFQ96BY9 339 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 TP53RKQ96S44 253 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 MMP25Q9NPA2 562 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 SIRT5Q9NXA8 310 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 FCGR3BO75015 233 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 OR5AC1P0C628 307 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 SLC6A1P30531 599 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 SMAD4Q13485 552 aaKnown RBP12.46□□□□□ -0.42
SPG11-210ENST00000558319 SSX1Q16384 188 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 THSD4Q6ZMP0 1018 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 BVESQ8NE79 360 aa12.46□□□□□ -0.42
SPG11-210ENST00000558319 ELOA3CA0A087WX78 387 aaPredicted RBP12.45□□□□□ -0.42
SPG11-210ENST00000558319 A0A1B0GTL3 188 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 SRFP11831 508 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 AURKAIP1Q9NWT8 199 aaPredicted RBP12.45□□□□□ -0.42
SPG11-210ENST00000558319 TECRQ9NZ01 308 aaKnown RBP12.45□□□□□ -0.42
SPG11-210ENST00000558319 PCDHGA9Q9Y5G4 932 aaKnown RBP12.45□□□□□ -0.42
SPG11-210ENST00000558319 PLRG1O43660 514 aaKnown RBP12.45□□□□□ -0.42
SPG11-210ENST00000558319 MPZL1O95297 269 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 FAM209AQ5JX71 171 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 NDUFB3O43676 98 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 MPV17LQ2QL34 196 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 CYB5R2Q6BCY4 276 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 NPAS1Q99742 590 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 C3orf85A0A1B0GTC6 90 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 RHBDL1O75783 438 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 OR5AU1Q8NGC0 362 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 OR2T10Q8NGZ9 312 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 OR1L3Q8NH93 324 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 SLC17A2O00624 439 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 BCL3P20749 454 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 LBHQ53QV2 105 aaPredicted RBP12.45□□□□□ -0.42
SPG11-210ENST00000558319 MRPL54Q6P161 138 aaKnown RBP12.45□□□□□ -0.42
SPG11-210ENST00000558319 ZNF683Q8IZ20 524 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 Q9N2K0 584 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 B9D1Q9UPM9 204 aa12.45□□□□□ -0.42
SPG11-210ENST00000558319 DUXBA0A1W2PPF3 345 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 M0QZ24 198 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 CXCL3P19876 107 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 CAPZBP47756 277 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 SRSF9Q13242 221 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPG11-210ENST00000558319 PNLIPRP3Q17RR3 467 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 ELFN2Q5R3F8 820 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 AMER3Q8N944 861 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 ABHD3Q8WU67 409 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 LAT2Q9GZY6 243 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 RASL12Q9NYN1 266 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 M0QZK8 103 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 GGCTO75223 188 aaKnown RBP12.44□□□□□ -0.42
SPG11-210ENST00000558319 GCSHP23434 173 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 OR10J1P30954 320 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 NKG7Q16617 165 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 CLPPQ16740 277 aaPredicted RBP12.44□□□□□ -0.42
SPG11-210ENST00000558319 LRRC10Q5BKY1 277 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 FAM209BQ5JX69 171 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 KIRREL2Q6UWL6 708 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 ERRFI1Q9UJM3 462 aaPredicted RBP12.44□□□□□ -0.42
SPG11-210ENST00000558319 A0A1W2PPC4 97 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 ADAP1O75689 374 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 LPAR6P43657 344 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 FNDC7Q5VTL7 733 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 ZDHHC22Q8N966 263 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 HSD17B10Q99714 261 aaKnown RBP12.44□□□□□ -0.42
SPG11-210ENST00000558319 PSG11Q9UQ72 335 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 SMIM6P0DI80 62 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 ORM2P19652 201 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 TMEM33P57088 247 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 ST6GAL2Q96JF0 529 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 OR2D2Q9H210 308 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 CRYBG1Q9Y4K1 1723 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 TMEM218A2RU14 115 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 ADAM11O75078 769 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 RAB33BQ9H082 229 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 SLC6A13Q9NSD5 602 aa12.44□□□□□ -0.42
SPG11-210ENST00000558319 IGHV3OR15-7A0A075B7D8 119 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 ACTL6AO96019 429 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 TP53I13Q8NBR0 393 aaPredicted RBP12.43□□□□□ -0.42
SPG11-210ENST00000558319 SLC25A43Q8WUT9 341 aaPredicted RBP12.43□□□□□ -0.42
SPG11-210ENST00000558319 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 AUP1Q9Y679 476 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 IL9P15248 144 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 GABRG2P18507 467 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 SSBP1Q04837 148 aaKnown RBP12.43□□□□□ -0.42
SPG11-210ENST00000558319 OR52L2PQ8NGH6 319 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 TAAR3PQ9P1P4 343 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms