RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PRB2P02812 416 aaPredicted RBP12.59□□□□□ -0.39
TPM1-211ENST00000558314 CHRM2P08172 466 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 GABRR1P24046 479 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 DUSP1P28562 367 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 POLR2IP36954 125 aaKnown RBP12.59□□□□□ -0.39
TPM1-211ENST00000558314 KIR2DS4P43632 304 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 IL24Q13007 206 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 UBE2V2Q15819 145 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 TP53I3Q53FA7 332 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 KDM4DQ6B0I6 523 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 FAM220AQ7Z4H9 259 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 CATSPERDQ86XM0 798 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 RDH10Q8IZV5 341 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 DYNAPQ8N1N2 210 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 PKIBQ9C010 78 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 CHST6Q9GZX3 395 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 HES4Q9HCC6 221 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 MTCH1Q9NZJ7 389 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 IGKV1-27A0A075B6S5 117 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 SAC3D1A6NKF1 404 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 G3V4G9 280 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 OCM2P0CE71 109 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 OCMP0CE72 109 aaPredicted RBP12.58□□□□□ -0.4
TPM1-211ENST00000558314 ZNF728P0DKX0 622 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 MPZP25189 248 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 HTR1FP30939 366 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 TRAPPC6BQ86SZ2 158 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 NDNFQ8TB73 568 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 IL36RNQ9UBH0 155 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 ENOPH1Q9UHY7 261 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 HILPDAQ9Y5L2 63 aa12.58□□□□□ -0.4
TPM1-211ENST00000558314 LOC107986453A0A1B0GWG9 222 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 TMEM82A0PJX8 343 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 DHRS7CA6NNS2 312 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 F2RL2O00254 374 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 HAND1O96004 215 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 IGHA1P01876 353 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 OR2T7P0C7T2 308 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 JUNBP17275 347 aaPredicted RBP12.57□□□□□ -0.4
TPM1-211ENST00000558314 CCL1P22362 96 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 FUT6P51993 359 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 OR12D2P58182 307 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 ERVK11-1P61568 191 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 EFNB1P98172 346 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 SLC34A1Q06495 639 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 CNN3Q15417 329 aaKnown RBP12.57□□□□□ -0.4
TPM1-211ENST00000558314 GRK1Q15835 563 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 AANATQ16613 207 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 ZNF676Q8N7Q3 588 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 PIFOQ8TCI5 191 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 RPS4Y2Q8TD47 263 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 ZNF714Q96N38 554 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 GABARAPL1Q9H0R8 117 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 RANBP3Q9H6Z4 567 aaPredicted RBP12.57□□□□□ -0.4
TPM1-211ENST00000558314 FAM53CQ9NYF3 392 aa12.57□□□□□ -0.4
TPM1-211ENST00000558314 hADV38S2A0JD32 116 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 C17orf98A8MV24 154 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 FBXO24O75426 580 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 CYB5AP00167 134 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 IGHV1-8P0DP01 117 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 CD28P10747 220 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 ZNF20P17024 532 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 PRKACAP17612 351 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 BCL3P20749 454 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 PEX2P28328 305 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 ATP1B3P54709 279 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 DLX6P56179 175 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 ACTA2P62736 377 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 ACTG2P63267 376 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 ACTC1P68032 377 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 ACTA1P68133 377 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 C11orf88Q6PI97 169 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 CRIP3Q6Q6R5 217 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 CCBE1Q6UXH8 406 aaPredicted RBP12.56□□□□□ -0.4
TPM1-211ENST00000558314 LIAT1Q6ZQX7 453 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 OR8H2Q8N162 312 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 PRSS35Q8N3Z0 413 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 RFT1Q96AA3 541 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 FOXRED1Q96CU9 486 aaPredicted RBP12.56□□□□□ -0.4
TPM1-211ENST00000558314 SNX22Q96L94 193 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 ZNF702PQ9H963 129 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 RBFOX1Q9NWB1 397 aaKnown RBP12.56□□□□□ -0.4
TPM1-211ENST00000558314 IMPAD1Q9NX62 359 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 ING3Q9NXR8 418 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 OAZ3Q9UMX2 235 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 TCF19Q9Y242 345 aa12.56□□□□□ -0.4
TPM1-211ENST00000558314 TBL2Q9Y4P3 447 aaKnown RBP12.56□□□□□ -0.4
TPM1-211ENST00000558314 A0A0G2JK05 382 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 SIRPB1O00241 398 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 ZNF737O75373 536 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 CIB2O75838 187 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 FCGR1AP12314 374 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 KIR3DL2P43630 455 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 NPBWR2P48146 333 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 MTCP1P56278 107 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 CDC42P60953 191 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 BNIP1Q12981 228 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 OR52N4Q8NGI2 321 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 RFKQ969G6 155 aa12.55□□□□□ -0.4
TPM1-211ENST00000558314 EME1Q96AY2 570 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms