RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.1□□□□□ -0.95
TPM1-210ENST00000558264 SPTBN2O15020 2390 aa9.1□□□□□ -0.95
TPM1-210ENST00000558264 RNF222A6NCQ9 220 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 CDRT15L2A8MXV6 281 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 RPL36A-HNRNPH2H7BZ11 118 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 SCO1O75880 301 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 SFT2D2O95562 160 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 OR5H8P0DN80 308 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 RPA2P15927 270 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 PTGER4P35408 488 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 WNT5AP41221 380 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 DAZAP2Q15038 168 aaPredicted RBP9.09□□□□□ -0.95
TPM1-210ENST00000558264 SLC22A25Q6T423 547 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 RFPL4BQ6ZWI9 263 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 P4HA3Q7Z4N8 544 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 MDP1Q86V88 176 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 SPSB4Q96A44 273 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 POM121L2Q96KW2 1035 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 REPIN1Q9BWE0 567 aaKnown RBP9.09□□□□□ -0.95
TPM1-210ENST00000558264 METTL8Q9H825 291 aaKnown RBP9.09□□□□□ -0.95
TPM1-210ENST00000558264 GSKIPQ9P0R6 139 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 ANXA10Q9UJ72 324 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 MED12LQ86YW9 2145 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 ARHGAP21Q5T5U3 1957 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 OR6C65A6NJZ3 312 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 ZNF732B4DXR9 585 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 LYZL6O75951 148 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 ACTL6AO96019 429 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 MPGP29372 298 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 LUMP51884 338 aaPredicted RBP9.09□□□□□ -0.95
TPM1-210ENST00000558264 P2RX3P56373 397 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 TAS2R31P59538 309 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 PLP2Q04941 152 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 FAHD2BQ6P2I3 314 aaPredicted RBP9.09□□□□□ -0.95
TPM1-210ENST00000558264 UNQ6126/PRO20091Q6UXV3 157 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 PEG10Q86TG7 708 aaKnown RBP9.09□□□□□ -0.95
TPM1-210ENST00000558264 TMEM178AQ8NBL3 297 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 FAHD2AQ96GK7 314 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 OR10C1Q96KK4 312 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 TRIB1Q96RU8 372 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 CHMP1AQ9HD42 196 aaPredicted RBP9.09□□□□□ -0.95
TPM1-210ENST00000558264 TNFSF18Q9UNG2 199 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 PRR14LQ5THK1 2151 aa9.09□□□□□ -0.95
TPM1-210ENST00000558264 DBX1A6NMT0 343 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 TPD52L2O43399 206 aaKnown RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 SYNGR1O43759 233 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 RBM11P57052 281 aaKnown RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 MALLQ13021 153 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 DEFB109BQ30KR1 87 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 SP6Q3SY56 376 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 LPCAT3Q6P1A2 487 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 THAP6Q8TBB0 222 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 DCUN1D4Q92564 292 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 CPNE2Q96FN4 548 aaPredicted RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 WBP1Q96G27 269 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 ZNF471Q9BX82 626 aaPredicted RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 ZNF391Q9UJN7 358 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 TNRC6AQ8NDV7 1962 aaKnown RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 NMBP08949 121 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 RPS2P15880 293 aaKnown RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 ERVS71-1P61550 626 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 FGL1Q08830 312 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 NRN1LQ496H8 165 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 PHLDA2Q53GA4 152 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 OR2T2Q6IF00 324 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 TMEM185AQ8NFB2 350 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 OR1K1Q8NGR3 316 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 APOBEC3DQ96AK3 386 aaPredicted RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 C14orf166Q9Y224 244 aaKnown RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 AKAP13Q12802 2813 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 TEX13DA0A0J9YY54 714 aaPredicted RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 H0YIZ8 118 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 CRHP06850 196 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 APLNRP35414 380 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 RBMXP38159 391 aaKnown RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 AANATQ16613 207 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 FBXW9Q5XUX1 488 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 HAGHLQ6PII5 290 aaPredicted RBP9.08□□□□□ -0.96
TPM1-210ENST00000558264 ASCL4Q6XD76 172 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 GLRX5Q86SX6 157 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 ZDHHC23Q8IYP9 409 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 C17orf78Q8N4C9 275 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 CNEP1R1Q8N9A8 125 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 ZDHHC11Q9H8X9 412 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 COQ3Q9NZJ6 369 aa9.08□□□□□ -0.96
TPM1-210ENST00000558264 ZNF292O60281 2723 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 PQLC2LA1A4F0 135 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 CD300LBA8K4G0 201 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 PDCD6O75340 191 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 CA6P23280 308 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 ARR3P36575 388 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 NOVA1P51513 510 aaKnown RBP9.07□□□□□ -0.96
TPM1-210ENST00000558264 IDH3GP51553 393 aaPredicted RBP9.07□□□□□ -0.96
TPM1-210ENST00000558264 S100A10P60903 97 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 IGSF11Q5DX21 431 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 BOLLQ8N9W6 283 aaKnown RBP9.07□□□□□ -0.96
TPM1-210ENST00000558264 SLC30A7Q8NEW0 376 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 ST8SIA2Q92186 375 aa9.07□□□□□ -0.96
TPM1-210ENST00000558264 RRNAD1Q96FB5 475 aaKnown RBP9.07□□□□□ -0.96
TPM1-210ENST00000558264 MTCH1Q9NZJ7 389 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms