RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 SEC22AQ96IW7 307 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 AQP10Q96PS8 301 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 CMSS1Q9BQ75 279 aaKnown RBP7.22□□□□□ -1.25
SPG11-209ENST00000558253 SUCNR1Q9BXA5 334 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 SHARPINQ9H0F6 387 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 PIGMQ9H3S5 423 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 METTL8Q9H825 291 aaKnown RBP7.22□□□□□ -1.25
SPG11-209ENST00000558253 FN3KRPQ9HA64 309 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 SPACA1Q9HBV2 294 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 GLRX2Q9NS18 164 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 GPR173Q9NS66 373 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 DEPPQ9NTK1 212 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 LOC100509620A0A075B734 347 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 A0A0G2JMM0 328 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 C13orf42A0A1B0GVH6 325 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 A0A1W2PPB8 328 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 FAM230AA0A1W2PPH8 454 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 A0A1W2PRS3 328 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 LNP1A1A4G5 178 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 CRYM-AS1A6NIL9 109 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 KIR3DP1A8MWS1 328 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 EEF1E1-BLOC1S5C9J1V9 151 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 NME2P1O60361 137 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 PDCD6O75340 191 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 S100A6P06703 90 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 SP1P08047 785 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 CTXN2P0C2S0 81 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 OR5H8P0DN80 308 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 B4GALT1P15291 398 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 NME2P22392 152 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 ACKR3P25106 362 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 GLP1RP43220 463 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 RRADP55042 308 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 CLDN18P56856 261 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 RPS18P62269 152 aaKnown RBP7.21□□□□□ -1.26
SPG11-209ENST00000558253 SMCO1Q147U7 214 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 SLC10A1Q14973 349 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 MPV17LQ2QL34 196 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 PABPC1L2AQ5JQF8 200 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 C17orf107Q6ZR85 190 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 MCEMP1Q8IX19 187 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 LRTM2Q8N967 370 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 CCDC71LQ8N9Z2 235 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 BVESQ8NE79 360 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 AKR7LQ8NHP1 331 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 RNF141Q8WVD5 230 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 DCUN1D4Q92564 292 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 TMEM230Q96A57 120 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 APH1AQ96BI3 265 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 GALNT14Q96FL9 552 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 WBP1Q96G27 269 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 HIST1H2AAQ96QV6 131 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 ZNF471Q9BX82 626 aaPredicted RBP7.21□□□□□ -1.26
SPG11-209ENST00000558253 PRRG4Q9BZD6 226 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 PLEKHA2Q9HB19 425 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 ZNF286AQ9HBT8 521 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 CSAG2Q9Y5P2 127 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 UNC80Q8N2C7 3258 aa7.21□□□□□ -1.26
SPG11-209ENST00000558253 ASCC3Q8N3C0 2202 aaKnown RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 A0A1W2PP11 408 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 ZNF850A8MQ14 1090 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 MPTX1A8MV57 137 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 SPDEFO95238 335 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 FCGR3AP08637 254 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 ZNF806P0C7X5 589 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 RPS2P15880 293 aaKnown RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 SDHBP21912 280 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 GABRR1P24046 479 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 ITGA3P26006 1051 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 NTF4P34130 210 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 PI4KAP42356 2102 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 RBM11P57052 281 aaKnown RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 SUPT4H1P63272 117 aaKnown RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 ARF1P84077 181 aaKnown RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 PLGLB1Q02325 96 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 ZNF92Q03936 586 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 IL15RAQ13261 267 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 ZNF169Q14929 603 aaPredicted RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 CEACAM21Q3KPI0 293 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 ABCA11PQ4W5N1 156 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 CCDC157Q569K6 752 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 TSPO2Q5TGU0 170 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 PLCXD3Q63HM9 321 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 SPINK14Q6IE38 97 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 BAP18Q8IXM2 172 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 LINC00469Q8N7U9 141 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 ZFP62Q8NB50 900 aaPredicted RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 POC1AQ8NBT0 407 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 OR5A2Q8NGI9 324 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 OR5D18Q8NGL1 313 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 OR10K1Q8NGX5 313 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 OR51F2Q8NH61 342 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 OR1S1Q8NH92 325 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 FNDC9Q8TBE3 224 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 NPRL2Q8WTW4 380 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 SAT2Q96F10 170 aaPredicted RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 ALKBH3Q96Q83 286 aaPredicted RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 ZNF2Q9BSG1 426 aaPredicted RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 TTTY12Q9BZ98 90 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 TMEM9BQ9NQ34 198 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms