RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 UBE2V2Q15819 145 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 PLA1AQ53H76 456 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 SLC25A26Q70HW3 274 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 LHFPL4Q7Z7J7 247 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 KLHDC1Q8N7A1 406 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 RFKQ969G6 155 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 GABARAPL3Q9BY60 117 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 ABCB10Q9NRK6 738 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 GNG8Q9UK08 70 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 OAZ3Q9UMX2 235 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 IGKV1-27A0A075B6S5 117 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 MEX3AA1L020 520 aaKnown RBP11.86□□□□□ -0.51
SHMT2-235ENST00000557740 C17orf98A8MV24 154 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 CHST1O43916 411 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 ZNF737O75373 536 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 CIB2O75838 187 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 RBP4P02753 201 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 UBCP0CG48 685 aaKnown RBP11.86□□□□□ -0.51
SHMT2-235ENST00000557740 DLX6P56179 175 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 CDC42P60953 191 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 TMED1Q13445 227 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 EDDM3AQ14507 147 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 CRIP3Q6Q6R5 217 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 C1QL4Q86Z23 238 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 EGFL6Q8IUX8 553 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 Q8IYB0 196 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 OR8H2Q8N162 312 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 C11orf44Q8N8P7 122 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 RPS4Y2Q8TD47 263 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 PP6455Q8WZ26 134 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 EMG1Q92979 244 aaKnown RBP11.86□□□□□ -0.51
SHMT2-235ENST00000557740 C10orf35Q96D05 121 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 CENPNQ96H22 339 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-235ENST00000557740 MTCH1Q9NZJ7 389 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 FOXJ3Q9UPW0 622 aa11.86□□□□□ -0.51
SHMT2-235ENST00000557740 TBL2Q9Y4P3 447 aaKnown RBP11.86□□□□□ -0.51
SHMT2-235ENST00000557740 SAC3D1A6NKF1 404 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 VGLL3A8MV65 326 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 ODF3BA8MYP8 253 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 F8VVB4 439 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 F8VWA3 439 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 ATP5HO75947 161 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 HAND1O96004 215 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 CYB5AP00167 134 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 VSIG10L2P0DP72 767 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 GABRR1P24046 479 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 POLR2IP36954 125 aaKnown RBP11.85□□□□□ -0.51
SHMT2-235ENST00000557740 POU3F4P49335 361 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 ATP1B3P54709 279 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 DYNC1I2Q13409 638 aaKnown RBP11.85□□□□□ -0.51
SHMT2-235ENST00000557740 FAM189A2Q15884 450 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 TP53I3Q53FA7 332 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 ENTHD1Q8IYW4 607 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 PRSS35Q8N3Z0 413 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 SNX22Q96L94 193 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 ZNF714Q96N38 554 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 IMPAD1Q9NX62 359 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 TCF19Q9Y242 345 aa11.85□□□□□ -0.51
SHMT2-235ENST00000557740 hADV38S2A0JD32 116 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 FAM90A8PA6NJQ4 464 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 OCM2P0CE71 109 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 OCMP0CE72 109 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-235ENST00000557740 IGHV1-8P0DP01 117 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 ZNF20P17024 532 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 KIR3DL2P43630 455 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 RBP2P50120 134 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 MEF2CQ06413 473 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-235ENST00000557740 GRK1Q15835 563 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 ZNF626Q68DY1 528 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 DYNAPQ8N1N2 210 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 PIFOQ8TCI5 191 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 EME1Q96AY2 570 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 MALSU1Q96EH3 234 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 OSBPL10Q9BXB5 764 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 CDCA4Q9BXL8 241 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 FAM53CQ9NYF3 392 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 PITPNC1Q9UKF7 332 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 ORC6Q9Y5N6 252 aa11.84□□□□□ -0.51
SHMT2-235ENST00000557740 TET2Q6N021 2002 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-235ENST00000557740 TRBV2A0A0J9YWF9 115 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 TMEM82A0PJX8 343 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 F2RL2O00254 374 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 PRKACBP22694 351 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 PEX2P28328 305 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 OR12D2P58182 307 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 ISL1P61371 349 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 ACTC1P68032 377 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 ACTA1P68133 377 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 ZNF85Q03923 595 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 ZNF91Q05481 1191 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 SSX2Q16385 188 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 TMEM244Q5VVB8 128 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 TRAPPC6BQ86SZ2 158 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 TMEM219Q86XT9 240 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 RDH10Q8IZV5 341 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 FAM58AQ8N1B3 248 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 ZNF676Q8N7Q3 588 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 DNAAF1Q8NEP3 725 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 OR11H6Q8NGC7 330 aa11.83□□□□□ -0.52
SHMT2-235ENST00000557740 CFHR4Q92496 578 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms