RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 TNS1Q9HBL0 1735 aaKnown RBP7.42□□□□□ -1.22
CHD8-213ENST00000557364 ZNF727A8MUV8 499 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 OR3A4PP47883 348 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 YBX1P67809 324 aaKnown RBP7.42□□□□□ -1.22
CHD8-213ENST00000557364 SLC25A35Q3KQZ1 300 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 SAT2Q96F10 170 aaPredicted RBP7.42□□□□□ -1.22
CHD8-213ENST00000557364 LRFN3Q9BTN0 628 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 C11orf54Q9H0W9 315 aaPredicted RBP7.42□□□□□ -1.22
CHD8-213ENST00000557364 ICAM5Q9UMF0 924 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 HMX2A2RU54 273 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 IGFBP1P08833 259 aaPredicted RBP7.42□□□□□ -1.22
CHD8-213ENST00000557364 RAB5AP20339 215 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 CTSSP25774 331 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 FOXO1Q12778 655 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 OR2B11Q5JQS5 317 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 FAM181AQ8N9Y4 354 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 GPR32P1Q8NGA4 272 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 DNASE2BQ8WZ79 361 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 VSTM2LQ96N03 204 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 GHITMQ9H3K2 345 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 NARFLQ9H6Q4 476 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 ZNF107Q9UII5 783 aaPredicted RBP7.42□□□□□ -1.22
CHD8-213ENST00000557364 PILRBQ9UKJ0 227 aa7.42□□□□□ -1.22
CHD8-213ENST00000557364 RPS19P39019 145 aaKnown RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 EVX1P49640 407 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 ZNF260Q3ZCT1 412 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 RPUSD4Q96CM3 377 aaKnown RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 ELOVL5Q9NYP7 299 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 ANKRD36A6QL64 1941 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 OR4E1P0C645 316 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 FAM106CPP0CH98 169 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 HIST1H1DP16402 221 aaKnown RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 COX7A1P24310 79 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 Q8WTZ3 238 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 PCDHGA9Q9Y5G4 932 aaKnown RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 TRDCB7Z8K6 153 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 PLPP2O43688 288 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 AMTP48728 403 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 CCR6P51684 374 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 HYAL4Q2M3T9 481 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 RBPMS2Q6ZRY4 209 aaKnown RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 TGIF2LYQ8IUE0 185 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 TGIF2LXQ8IUE1 241 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 MYEOVQ96EZ4 313 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 TMEM165Q9HC07 324 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 ZNF275Q9NSD4 429 aaPredicted RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 SCN2AQ99250 2005 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 SBF1O95248 1867 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 CHD5Q8TDI0 1954 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 A0A1W2PS18 150 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 POLR2IP36954 125 aaKnown RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 MRPS11P82912 194 aaKnown RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 PAX5Q02548 391 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 VN1R4Q7Z5H5 301 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 TGIF2Q9GZN2 237 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 RANGRFQ9HD47 186 aaPredicted RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 COA4Q9NYJ1 87 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 OTOFQ9HC10 1997 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 GNG7O60262 68 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 WDR31Q8NA23 367 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 TMEM167BQ9NRX6 74 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 CKAP5Q14008 2032 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 PARP14Q460N5 1801 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 ZFC3H1O60293 1989 aaKnown RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 COL11A2P13942 1736 aaPredicted RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 MAGEB1P43366 347 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 RPUSD3Q6P087 351 aaKnown RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 TMEM182Q6ZP80 229 aaPredicted RBP7.41□□□□□ -1.22
CHD8-213ENST00000557364 NUDT8Q8WV74 236 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 C20orf24Q9BUV8 137 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 GP6Q9HCN6 339 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 J3QT63 122 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 SLC31A2O15432 143 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 ADAM11O75078 769 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 EML2O95834 649 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 ACSM4P0C7M7 580 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 CCL4P13236 92 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 C12orf73Q69YU5 71 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 ZNF547Q8IVP9 402 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 TCTEX1D1Q8N7M0 179 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 PSG11Q9UQ72 335 aa7.41□□□□□ -1.22
CHD8-213ENST00000557364 OR2T8A6NH00 312 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 AREGP15514 252 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 FGF9P31371 208 aaPredicted RBP7.4□□□□□ -1.22
CHD8-213ENST00000557364 COX19Q49B96 90 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 DGAT2L7PQ6IED9 249 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 RIMKLAQ8IXN7 391 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 STPG3Q8N7X2 389 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 LRRC37AA6NMS7 1700 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 PATJQ8NI35 1801 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 J3QR89 54 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 RER1O15258 196 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 SPRY1O43609 319 aaPredicted RBP7.4□□□□□ -1.22
CHD8-213ENST00000557364 MC5RP33032 325 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 OLIG3Q7RTU3 272 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 JMJD8Q96S16 334 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 SMOC1Q9H4F8 434 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 FCGR3BO75015 233 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 FOSL1P15407 271 aa7.4□□□□□ -1.22
CHD8-213ENST00000557364 VDAC1P21796 283 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms