RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RHOFQ9HBH0 211 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 OR14J1Q9UGF5 321 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 MAB21L2Q9Y586 359 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 PCDHGB5Q9Y5G0 923 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 KPTNQ9Y664 436 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 SIRT4Q9Y6E7 314 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-209ENST00000557342 TRBV23-1A0A0A0MS06 115 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 LALBAP00709 142 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 CD1AP06126 327 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 CHRM2P08172 466 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 SELLP14151 372 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 SOX2P48431 317 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 PDCD1Q15116 288 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 KLF17Q5JT82 389 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-209ENST00000557342 GPR157Q5UAW9 335 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 SAXO1Q8IYX7 474 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 BATF2Q8N1L9 274 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 FGFRL1Q8N441 504 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 CD177Q8N6Q3 437 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 KIR3DL3Q8N743 410 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 ZSCAN4Q8NAM6 433 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-209ENST00000557342 ZNRF1Q8ND25 227 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 RGP1Q92546 391 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-209ENST00000557342 GHSRQ92847 366 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 EMG1Q92979 244 aaKnown RBP10.32□□□□□ -0.76
SLIRP-209ENST00000557342 TMEM106AQ96A25 262 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 PCGF1Q9BSM1 259 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 CDCA4Q9BXL8 241 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 MS4A7Q9GZW8 240 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-209ENST00000557342 FAM234AQ9H0X4 552 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 SEBOXQ9HB31 216 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-209ENST00000557342 GLS2Q9UI32 602 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 SVEP1Q4LDE5 3571 aa10.32□□□□□ -0.76
SLIRP-209ENST00000557342 DSCAML1Q8TD84 2053 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 TRAV40A0A0B4J280 105 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 DENRO43583 198 aaKnown RBP10.31□□□□□ -0.76
SLIRP-209ENST00000557342 SPRY1O43609 319 aaPredicted RBP10.31□□□□□ -0.76
SLIRP-209ENST00000557342 TFF1P04155 84 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 ALDOBP05062 364 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 MMP9P14780 707 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 ARF6P62330 175 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 PPP3R1P63098 170 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 SLC35A2P78381 396 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 BDH1Q02338 343 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 ACSM1Q08AH1 577 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 BLMHQ13867 455 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 KISS1Q15726 138 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 Q499Y3 187 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 ZNF529Q6P280 563 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 RBMS3Q6XE24 437 aaKnown RBP10.31□□□□□ -0.76
SLIRP-209ENST00000557342 FAM58AQ8N1B3 248 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 ZFP41Q8N8Y5 198 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 TBC1D15Q8TC07 691 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 THRSPQ92748 146 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 RFT1Q96AA3 541 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 PGLYRP3Q96LB9 341 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 CNBD2Q96M20 576 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 SLC6A7Q99884 636 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 SIRPDQ9H106 197 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 ONECUT1Q9UBC0 465 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 CUBNO60494 3623 aa10.31□□□□□ -0.76
SLIRP-209ENST00000557342 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 TRBV5-5A0A0J9YX44 114 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 A0A1W2PPH5 198 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 A0A1W2PQ09 198 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 RNF212BA8MTL3 300 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 F8VVB4 439 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 F8VWA3 439 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 KDM4BO94953 1096 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 INMTO95050 263 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 TK1P04183 234 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 IGHV4-38-2P0DP08 117 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 TMEM225BP0DP42 221 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 CELP19835 753 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 BCL3P20749 454 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 NPBWR2P48146 333 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 BMXP51813 675 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 HILS1P60008 231 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 COL10A1Q03692 680 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 SPIN3Q5JUX0 258 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 RBM48Q5RL73 367 aaKnown RBP10.3□□□□□ -0.76
SLIRP-209ENST00000557342 C9orf139Q6ZV77 190 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 OR5D13Q8NGL4 314 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 C22orf15Q8WYQ4 148 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 SPACA5Q96QH8 159 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 TBX15Q96SF7 602 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 GPER1Q99527 375 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 DUSP21Q9H596 190 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 TMEM138Q9NPI0 162 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 TAS2R4Q9NYW5 299 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 CKLFQ9UBR5 152 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 ZNF69Q9UC07 566 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 BLOC1S6Q9UL45 172 aa10.3□□□□□ -0.76
SLIRP-209ENST00000557342 IGHV3OR16-10A0A075B7F0 116 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 PNMA8CA0A1B0GUJ8 204 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 K7N7A8 449 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 M0R1W7 72 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 RGS10O43665 173 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 ANGPTL7O43827 346 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 HAND1O96004 215 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms