RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 PDCD5O14737 125 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 SLC22A1O15245 554 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 CYB5AP00167 134 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 SLC2A2P11168 524 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 PSG2P11465 335 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 MUC1P15941 1255 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 RAB3BP20337 219 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 USF1P22415 310 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 DUSP1P28562 367 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 RPS19P39019 145 aaKnown RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 SNU13P55769 128 aaKnown RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 CLDN12P56749 244 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 SEC61A1P61619 476 aaKnown RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 TMEM155Q4W5P6 130 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 HES5Q5TA89 166 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 STUMQ69YW2 141 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 AWAT2Q6E213 333 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 CLVS1Q8IUQ0 354 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 FAM58AQ8N1B3 248 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 FGFRL1Q8N441 504 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 CD177Q8N6Q3 437 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 PNLDC1Q8NA58 520 aaKnown RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 ANGPTL6Q8NI99 470 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 EMG1Q92979 244 aaKnown RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 FOXRED1Q96CU9 486 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 CPNE2Q96FN4 548 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-227ENST00000557269 CCL13Q99616 98 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 GAL3ST1Q99999 423 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 HMG20AQ9NP66 347 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 ZNF581Q9P0T4 197 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 CTSZQ9UBR2 303 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 DNAJB11Q9UBS4 358 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 METRNQ9UJH8 293 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 ZNF222Q9UK12 451 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 MYO9AB2RTY4 2548 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 TRAV38-1A0A0B4J264 116 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 RFPL4AA6NLU0 287 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 IFITM5A6NNB3 132 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 RFPL4AL1F8VTS6 287 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 SLC17A2O00624 439 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 HTR3BO95264 441 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 WNT2P09544 360 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 SELLP14151 372 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 PRKACAP17612 351 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 SERPINA2P20848 420 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 HTR2CP28335 458 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 QRFPP83859 136 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 LOXL1Q08397 574 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-227ENST00000557269 PLA2G7Q13093 441 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 PDCD1Q15116 288 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 RSU1Q15404 277 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 MICBQ29980 383 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 SLC22A6Q4U2R8 563 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 ELP2Q6IA86 826 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 OR10K2Q6IF99 312 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 SPNS3Q6ZMD2 512 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 TPRA1Q86W33 373 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 FAM216BQ8N7L0 139 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 TMEM104Q8NE00 496 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 Q8NFD4 153 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 OR6M1Q8NGM8 313 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 NDNFQ8TB73 568 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 TBC1D15Q8TC07 691 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 C12orf43Q96C57 262 aaKnown RBP10.69□□□□□ -0.7
SHMT2-227ENST00000557269 METTL9Q9H1A3 318 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 PLGRKTQ9HBL7 147 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 IL36GQ9NZH8 169 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 CEPT1Q9Y6K0 416 aa10.69□□□□□ -0.7
SHMT2-227ENST00000557269 MAP1AP78559 2803 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-227ENST00000557269 FAM157AC9JC47 383 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 F5H0A9 414 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-227ENST00000557269 SMAD7O15105 426 aaKnown RBP10.68□□□□□ -0.7
SHMT2-227ENST00000557269 KNG1P01042 644 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 IGHV2-5P01817 119 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 VSIG8P0DPA2 414 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 PRDX2P32119 198 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 GABRA2P47869 451 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 FGF12P61328 243 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 BLMHQ13867 455 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 RAB11BQ15907 218 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 SMIM21Q3B7S5 101 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 PIGYQ3MUY2 71 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 ATPAF1Q5TC12 328 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-227ENST00000557269 ZNF841Q6ZN19 808 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 DCDC5Q6ZRR9 648 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 Q8IYB0 196 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 MUC20Q8N307 709 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-227ENST00000557269 FAM46BQ96A09 425 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 CYYR1Q96J86 154 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 GAFA1Q96PS6 74 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 BANF2Q9H503 90 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 ZNF665Q9H7R5 613 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 PATZ1Q9HBE1 687 aaKnown RBP10.68□□□□□ -0.7
SHMT2-227ENST00000557269 OR14J1Q9UGF5 321 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 MAB21L2Q9Y586 359 aa10.68□□□□□ -0.7
SHMT2-227ENST00000557269 CR1P17927 2039 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 ITPR3Q14573 2671 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 NOTOA8MTQ0 251 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 AIPO00170 330 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 TMPRSS2O15393 492 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms