RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CDK5Q00535 292 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 CD83Q01151 205 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 ROM1Q03395 351 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 ZNF829Q3KNS6 432 aaPredicted RBP6.97□□□□□ -1.29
VRK1-206ENST00000557222 CEP78Q5JTW2 689 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 CLVS2Q5SYC1 327 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 ZNF684Q5T5D7 378 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 FOXB2Q5VYV0 432 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 PLCXD3Q63HM9 321 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 ZNF626Q68DY1 528 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 TMEM42Q69YG0 159 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 CCBE1Q6UXH8 406 aaPredicted RBP6.97□□□□□ -1.29
VRK1-206ENST00000557222 MOB3CQ70IA8 216 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 C16orf82Q7Z2V1 217 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 ZNF679Q8IYX0 411 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 GIPC3Q8TF64 312 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 ASB17Q8WXJ9 295 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 FEVQ99581 238 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 NKX3-1Q99801 234 aaPredicted RBP6.97□□□□□ -1.29
VRK1-206ENST00000557222 CITED2Q99967 270 aaPredicted RBP6.97□□□□□ -1.29
VRK1-206ENST00000557222 NIPSNAP1Q9BPW8 284 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 NRIP2Q9BQI9 281 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 TEX12Q9BXU0 123 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 PBOV1Q9GZY1 135 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 HES4Q9HCC6 221 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.97□□□□□ -1.29
VRK1-206ENST00000557222 FAM206AQ9NX38 181 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 VNN3Q9NY84 501 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 NUFIP1Q9UHK0 495 aaKnown RBP6.97□□□□□ -1.29
VRK1-206ENST00000557222 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.97□□□□□ -1.29
VRK1-206ENST00000557222 TMEM14AQ9Y6G1 99 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 RYR3Q15413 4870 aa6.97□□□□□ -1.29
VRK1-206ENST00000557222 FAM90A22PA8MWA6 464 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 F2RL2O00254 374 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 NXPH2O95156 264 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 ARG1P05089 322 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 CHRM2P08172 466 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 RAP2AP10114 183 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 ATP6V1B2P21281 511 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 SLC2A5P22732 501 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 COX7A1P24310 79 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 VDAC2P45880 294 aaPredicted RBP6.96□□□□□ -1.3
VRK1-206ENST00000557222 HAAOP46952 286 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 OR12D2P58182 307 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 ACTR3P61158 418 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 ERVK11-1P61568 191 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 MEF2CQ06413 473 aaPredicted RBP6.96□□□□□ -1.3
VRK1-206ENST00000557222 PPP1R8Q12972 351 aaKnown RBP6.96□□□□□ -1.3
VRK1-206ENST00000557222 TRIM25Q14258 630 aaKnown RBP6.96□□□□□ -1.3
VRK1-206ENST00000557222 ZNF273Q14593 569 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 GINS1Q14691 196 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 PLBD1Q6P4A8 553 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 ZBTB49Q6ZSB9 765 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 Q6ZSR3 168 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 LHFPL4Q7Z7J7 247 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 DHFR2Q86XF0 187 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 CPOQ8IVL8 374 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 IQCF1Q8N6M8 205 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 OR51E1Q8TCB6 317 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 OR8B4Q96RC9 309 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 PKIBQ9C010 78 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 MOB1AQ9H8S9 216 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 GPR84Q9NQS5 396 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 ARL8BQ9NVJ2 186 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 ZNF446Q9NWS9 450 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 PIGLQ9Y2B2 252 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 KLHDC2Q9Y2U9 406 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 U3KQV3 271 aa6.96□□□□□ -1.3
VRK1-206ENST00000557222 PQLC2LA1A4F0 135 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 ZNF737O75373 536 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 DCTN3O75935 186 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 IGHV1-8P0DP01 117 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 OSMP13725 252 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 CCL3L1P16619 93 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 RIDAP52758 137 aaKnown RBP6.95□□□□□ -1.3
VRK1-206ENST00000557222 IL24Q13007 206 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 IL18R1Q13478 541 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 SSX2Q16385 188 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 PIGWQ7Z7B1 504 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 COMMD2Q86X83 199 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 LYG1Q8N1E2 194 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 DYNAPQ8N1N2 210 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 OR4M1Q8NGD0 313 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 AKR1E2Q96JD6 320 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 MNTQ99583 582 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 TEAD3Q99594 435 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 SPATA25Q9BR10 227 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 KRTAP4-2Q9BYR5 136 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 GPR61Q9BZJ8 451 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 ZNF556Q9HAH1 456 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 SLC25A19Q9HC21 320 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 ARL2BPQ9Y2Y0 163 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 V9GYS6 101 aa6.95□□□□□ -1.3
VRK1-206ENST00000557222 DSCAML1Q8TD84 2053 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 hADV38S2A0JD32 116 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 SYNGR1O43759 233 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 CST1P01037 141 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 TTRP02766 147 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 ANXA8P13928 327 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 PAX6P26367 422 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms