RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 OR6C1Q96RD1 312 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 UCN2Q96RP3 112 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 ABHD14AQ9BUJ0 271 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 TGIF2Q9GZN2 237 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 ARV1Q9H2C2 271 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 NELFAQ9H3P2 528 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 AKIRIN1Q9H9L7 192 aaPredicted RBP9.92□□□□□ -0.82
SRP54-213ENST00000556994 KCNJ16Q9NPI9 418 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 NECAP2Q9NVZ3 263 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 CELSR3Q9NYQ7 3312 aa9.92□□□□□ -0.82
SRP54-213ENST00000556994 A0A0U1RQV5 110 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 GPR137BO60478 399 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 RD3LP0DJH9 198 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 GLB1P16278 677 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 CTSSP25774 331 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 ECI1P42126 302 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 CEBPGP53567 150 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 POLR2GP62487 172 aaKnown RBP eCLIP9.91□□□□□ -0.82
SRP54-213ENST00000556994 ZNF239Q16600 458 aaKnown RBP9.91□□□□□ -0.82
SRP54-213ENST00000556994 PIGYQ3MUY2 71 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 SLC22A25Q6T423 547 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 MEX3BQ6ZN04 569 aaKnown RBP9.91□□□□□ -0.82
SRP54-213ENST00000556994 ZNF565Q8N9K5 539 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 OR5L2Q8NGL0 311 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 HPSE2Q8WWQ2 592 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 SPSB2Q99619 263 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 GINS3Q9BRX5 216 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 CHRDQ9H2X0 955 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 METTL1Q9UBP6 276 aaKnown RBP9.91□□□□□ -0.82
SRP54-213ENST00000556994 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 G3V3Y1 287 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 GEMIN2O14893 280 aaKnown RBP9.91□□□□□ -0.82
SRP54-213ENST00000556994 EIF1BO60739 113 aaKnown RBP9.91□□□□□ -0.82
SRP54-213ENST00000556994 ZFAND5O76080 213 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 IGHV2-5P01817 119 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 EIF1P41567 113 aaKnown RBP9.91□□□□□ -0.82
SRP54-213ENST00000556994 LBX1P52954 281 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 LSM6P62312 80 aaKnown RBP9.91□□□□□ -0.82
SRP54-213ENST00000556994 CCL20P78556 96 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 CLINT1Q14677 625 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 ZNF574Q6ZN55 896 aaPredicted RBP9.91□□□□□ -0.82
SRP54-213ENST00000556994 CPEB2Q7Z5Q1 589 aaKnown RBP9.91□□□□□ -0.82
SRP54-213ENST00000556994 C5orf24Q7Z6I8 188 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 SUMF1Q8NBK3 374 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 SMRP1Q8NCR6 262 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 RNF138Q8WVD3 245 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 NABP1Q96AH0 204 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 TAAR9Q96RI9 348 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 RASL10BQ96S79 203 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 METTL9Q9H1A3 318 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 SLC35B3Q9H1N7 401 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 SLC2A9Q9NRM0 540 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 DECR2Q9NUI1 292 aa9.91□□□□□ -0.82
SRP54-213ENST00000556994 DMDP11532 3685 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 NSG1A0A0A6YYJ2 146 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 SLC33A1O00400 549 aaPredicted RBP9.9□□□□□ -0.82
SRP54-213ENST00000556994 PHF1O43189 567 aaPredicted RBP9.9□□□□□ -0.82
SRP54-213ENST00000556994 CELA2AP08217 269 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 PATE4P0C8F1 98 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 OMGP23515 440 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 ZNF133P52736 654 aaPredicted RBP9.9□□□□□ -0.82
SRP54-213ENST00000556994 UCP2P55851 309 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 ARL6IP1Q15041 203 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 ACER2Q5QJU3 275 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 SLAMF9Q96A28 289 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 TUBA4BQ9H853 241 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 IGLV3-12A0A075B6K2 115 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 FAM24AA6NFZ4 105 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 ZNF727A8MUV8 499 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 CDRT15L2A8MXV6 281 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 CA11O75493 328 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 SCRG1O75711 98 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 DUSP1P28562 367 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 PPA1Q15181 289 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 RTL6Q6ICC9 239 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 LIAT1Q6ZQX7 453 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 OR10AD1Q8NGE0 317 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 OR1J1Q8NGS3 322 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 EDARADDQ8WWZ3 215 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 MSI2Q96DH6 328 aaKnown RBP9.9□□□□□ -0.82
SRP54-213ENST00000556994 C18orf12Q96KH6 178 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 JSRP1Q96MG2 331 aaPredicted RBP9.9□□□□□ -0.82
SRP54-213ENST00000556994 BCL2L14Q9BZR8 327 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 CA14Q9ULX7 337 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 HDGFL3Q9Y3E1 203 aa9.9□□□□□ -0.82
SRP54-213ENST00000556994 IGLV3-32A0A0A0MS00 114 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 CCDC163A0A0D9SF12 145 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 H7C1Q1 480 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 ST8SIA3O43173 380 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 YIF1AO95070 293 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 ONECUT2O95948 504 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 CD63P08962 238 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 COMMD1Q8N668 190 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 SLC35G3Q8N808 338 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 ZFP62Q8NB50 900 aaPredicted RBP9.89□□□□□ -0.83
SRP54-213ENST00000556994 SPACA9Q96E40 222 aaPredicted RBP9.89□□□□□ -0.83
SRP54-213ENST00000556994 GALNT14Q96FL9 552 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 TP53RKQ96S44 253 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 GPHA2Q96T91 129 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 DEFB126Q9BYW3 111 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms