RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 RFPL4AL1F8VTS6 287 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 TRAPPC2LH3BP13 241 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 DVL1O14640 695 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 GPX5O75715 221 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 SC5DO75845 299 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 ACAA1P09110 424 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-225ENST00000556798 TMEM225BP0DP42 221 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 OR3A4PP47883 348 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 SNU13P55769 128 aaKnown RBP14.54□□□□□ -0.08
SHMT2-225ENST00000556798 NEDD8Q15843 81 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 UNQ9370/PRO34162Q6UXP9 181 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 TMEM91Q6ZNR0 172 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 ZNF788Q6ZQV5 615 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 SLC36A1Q7Z2H8 476 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 TNFAIP8L1Q8WVP5 186 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 THRSPQ92748 146 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 PPIL3Q9H2H8 161 aaKnown RBP14.54□□□□□ -0.08
SHMT2-225ENST00000556798 MMP26Q9NRE1 261 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 KAAG1Q9UBP8 84 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 OR5V1Q9UGF6 321 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 METRNQ9UJH8 293 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 FOXJ3Q9UPW0 622 aa14.54□□□□□ -0.08
SHMT2-225ENST00000556798 RGS9O75916 674 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-225ENST00000556798 TNFAIP8O95379 198 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 ALDOBP05062 364 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 CPT2P23786 658 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 GABRA5P31644 462 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 ZNF93P35789 620 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-225ENST00000556798 GP2P55259 537 aaKnown RBP14.53□□□□□ -0.08
SHMT2-225ENST00000556798 FABP5Q01469 135 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 DGUOKQ16854 277 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 CR1LQ2VPA4 569 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 IL17RELQ6ZVW7 336 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 C1QL2Q7Z5L3 287 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 CD177Q8N6Q3 437 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 ST8SIA4Q92187 359 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 FCGR1BQ92637 280 aa14.53□□□□□ -0.08
SHMT2-225ENST00000556798 CPNE2Q96FN4 548 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-225ENST00000556798 C22orf46C9J442 243 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 NDUFB3O43676 98 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 KDM4BO94953 1096 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 KNG1P01042 644 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 SFTPBP07988 381 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 PRKACAP17612 351 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 NPY4RP50391 375 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 IL13RA1P78552 427 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 TRAM1Q15629 374 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 HSD17B12Q53GQ0 312 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 ATPAF1Q5TC12 328 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-225ENST00000556798 DCAF12L2Q5VW00 463 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 FAHD2BQ6P2I3 314 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-225ENST00000556798 FAM58AQ8N1B3 248 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 FAHD2AQ96GK7 314 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 DNTTIP1Q9H147 329 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 ELL3Q9HB65 397 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-225ENST00000556798 NDUFB11Q9NX14 153 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 MAB21L2Q9Y586 359 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 DSCAML1Q8TD84 2053 aa14.52□□□□□ -0.09
SHMT2-225ENST00000556798 SVEP1Q4LDE5 3571 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 A0A0G2JMP0 313 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 A0A0X1KG70 313 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 SIGLEC5O15389 551 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 CDRT1O95170 752 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 UCHL1P09936 223 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 PSMA1P25786 263 aaKnown RBP14.51□□□□□ -0.09
SHMT2-225ENST00000556798 DUSP1P28562 367 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 PRDX2P32119 198 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 FAM120AOSQ5T036 256 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 Q8IYB0 196 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 SAXO1Q8IYX7 474 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 JAGN1Q8N5M9 183 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 ZSCAN4Q8NAM6 433 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-225ENST00000556798 ZNRF1Q8ND25 227 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 TMEM185AQ8NFB2 350 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 TSPAN14Q8NG11 270 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 OR4M2Q8NGB6 313 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 OR10K1Q8NGX5 313 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 SDSLQ96GA7 329 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 TCF7L1Q9HCS4 588 aa14.51□□□□□ -0.09
SHMT2-225ENST00000556798 POLR3KQ9Y2Y1 108 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-225ENST00000556798 LOC105371242A0A075B767 164 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 IGHV2-70DA0A0C4DH43 119 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 CCRL2O00421 344 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 ADRA2CP18825 462 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 PTGFRP43088 359 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 PAX2Q02962 417 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 LRRC10Q5BKY1 277 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 FIP1L1Q6UN15 594 aaKnown RBP14.5□□□□□ -0.09
SHMT2-225ENST00000556798 BTN2A1Q7KYR7 527 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 LRRTM1Q86UE6 522 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 PNLDC1Q8NA58 520 aaKnown RBP14.5□□□□□ -0.09
SHMT2-225ENST00000556798 MUL1Q969V5 352 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 MED30Q96HR3 178 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 ZNF696Q9H7X3 374 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 HMG20AQ9NP66 347 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 SLC25A10Q9UBX3 287 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-225ENST00000556798 GSTK1Q9Y2Q3 226 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 INSIG2Q9Y5U4 225 aa14.5□□□□□ -0.09
SHMT2-225ENST00000556798 SETD2Q9BYW2 2564 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-225ENST00000556798 HAND1O96004 215 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms