RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 CD8AP01732 235 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 MUC1P15941 1255 aaPredicted RBP7.79□□□□□ -1.16
ACTN1-218ENST00000556343 PRKACAP17612 351 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 ELK1P19419 428 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 QRFPP83859 136 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 IL18Q14116 193 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 MPPED2Q15777 294 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 MPV17LQ2QL34 196 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 NHLRC3Q5JS37 347 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 SPIN3Q5JUX0 258 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 C11orf71Q6IPW1 123 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 PYHIN1Q6K0P9 492 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 CNIH2Q6PI25 160 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 WDR82Q6UXN9 313 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 Q6ZTK2 550 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 RNF144BQ7Z419 303 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 WDR86Q86TI4 376 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 LAX1Q8IWV1 398 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 C11orf53Q8IXP5 236 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 CMTM4Q8IZR5 234 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 OR10R2Q8NGX6 335 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 PPP1R35Q8TAP8 253 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 CCL17Q92583 94 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 RDH5Q92781 318 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 TIMD4Q96H15 378 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 CCL19Q99731 98 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 NKX3-1Q99801 234 aaPredicted RBP7.79□□□□□ -1.16
ACTN1-218ENST00000556343 NRIP2Q9BQI9 281 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 PLEKHF2Q9H8W4 249 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 MYOZ1Q9NP98 299 aaPredicted RBP7.79□□□□□ -1.16
ACTN1-218ENST00000556343 TMEM106BQ9NUM4 274 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 PLEKHJ1Q9NW61 149 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 ICE1Q9Y2F5 2266 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 TRAV18A0A075B6X5 111 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 PPIAL4EA0A075B759 164 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 TRAV38-1A0A0B4J264 116 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 SRRM5B3KS81 715 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 PPIAL4DF5H284 164 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 NDUFA2O43678 99 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 RHBDL1O75783 438 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 OR7C1O76099 320 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 F12P00748 615 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 KNG1P01042 644 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 GLAP06280 429 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 EIF4EP06730 217 aaKnown RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 SFTPBP07988 381 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 PPIAL4FP0DN26 164 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 FUT3P21217 361 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 GABRR1P24046 479 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 CDK2P24941 298 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 BLVRBP30043 206 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 ETV6P41212 452 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 NPBWR2P48146 333 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 VEGFCP49767 419 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 EFNA4P52798 201 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 RBM11P57052 281 aaKnown RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 ERVK11-1P61568 191 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 MRPS10P82664 201 aaKnown RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 UNC119Q13432 240 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 RBM39Q14498 530 aaKnown RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 MICBQ29980 383 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 PYDC2Q56P42 97 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 OR10K2Q6IF99 312 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 CRIP3Q6Q6R5 217 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 ACP7Q6ZNF0 438 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 ZNF826PQ6ZT77 177 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 CCDC190Q86UF4 302 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 ZCCHC24Q8N2G6 241 aaKnown RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 GDPD1Q8N9F7 314 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 BOLLQ8N9W6 283 aaKnown RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 TMEM104Q8NE00 496 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 RAB1CQ92928 201 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 MARVELD3Q96A59 401 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 RAB3CQ96E17 227 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 C1orf147Q96MC9 270 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 GAL3ST1Q99999 423 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 SEBOXQ9HB31 216 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 BARX1Q9HBU1 254 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 RBFOX1Q9NWB1 397 aaKnown RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 PLEKHA6Q9Y2H5 1048 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 MRPS7Q9Y2R9 242 aaKnown RBP7.78□□□□□ -1.16
ACTN1-218ENST00000556343 PPIAL4AQ9Y536 164 aa7.78□□□□□ -1.16
ACTN1-218ENST00000556343 OOEPA6NGQ2 149 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 SERPINE3A8MV23 424 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 MCRIP1C9JLW8 97 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 TMEM178BH3BS89 294 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 LGALS8O00214 317 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 SULT1C2O00338 296 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 PDCD6O75340 191 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 LHBP01229 141 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 GSTP1P09211 210 aaKnown RBP7.77□□□□□ -1.17
ACTN1-218ENST00000556343 DAOP14920 347 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 ZNF44P15621 663 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 CD40LGP29965 261 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 PMELP40967 661 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 KCNJ3P48549 501 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 INPP1P49441 399 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 EFNB2P52799 333 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 PPP5CP53041 499 aa7.77□□□□□ -1.17
ACTN1-218ENST00000556343 TMEM33P57088 247 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms