RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ZDHHC22Q8N966 263 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 ZNRF1Q8ND25 227 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 OR5AK2Q8NH90 309 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 RPS4Y2Q8TD47 263 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 FBLIM1Q8WUP2 373 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 H1FXQ92522 213 aaKnown RBP9.51□□□□□ -0.89
SLIRP-205ENST00000556310 ZNF48Q96MX3 618 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-205ENST00000556310 OPALINQ96PE5 141 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 PDCD1LG2Q9BQ51 273 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 CNTD2Q9H8S5 307 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 ESM1Q9NQ30 184 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 ONECUT1Q9UBC0 465 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 DSCAML1Q8TD84 2053 aa9.51□□□□□ -0.89
SLIRP-205ENST00000556310 TENM1Q9UKZ4 2725 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 TRBV2A0A0J9YWF9 115 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 EFCAB10A6NFE3 127 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 OCM2P0CE71 109 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 OCMP0CE72 109 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-205ENST00000556310 NDUFB7P17568 137 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 PRDX2P32119 198 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 POU3F4P49335 361 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 CDK5R1Q15078 307 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 CCDC58Q4VC31 144 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 OR2G6Q5TZ20 316 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 RPL22L1Q6P5R6 122 aaKnown RBP9.5□□□□□ -0.89
SLIRP-205ENST00000556310 BRD3OSQ6XYD6 125 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 SLC25A26Q70HW3 274 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 Q8IYB0 196 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 CMTM4Q8IZR5 234 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 BATF2Q8N1L9 274 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 PARP16Q8N5Y8 322 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 CD177Q8N6Q3 437 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 OR13C9Q8NGT0 318 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 OR52N1Q8NH53 320 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 TSEN15Q8WW01 171 aaKnown RBP9.5□□□□□ -0.89
SLIRP-205ENST00000556310 TFAP2CQ92754 450 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 SLAMF9Q96A28 289 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 TMEM80Q96HE8 168 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 ZCCHC4Q9H5U6 513 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 ZMAT3Q9HA38 289 aaKnown RBP9.5□□□□□ -0.89
SLIRP-205ENST00000556310 ELL3Q9HB65 397 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-205ENST00000556310 NEK6Q9HC98 313 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 MTCH1Q9NZJ7 389 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 CNOT2Q9NZN8 540 aaKnown RBP9.5□□□□□ -0.89
SLIRP-205ENST00000556310 DHDHQ9UQ10 334 aa9.5□□□□□ -0.89
SLIRP-205ENST00000556310 CENPVL3A0A0U1RRI6 287 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 A0A1W2PQ09 198 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 DNAJC9-AS1A6NH13 148 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 H0YJX3 145 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 M0R1W7 72 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 CYB5AP00167 134 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 CEBPDP49716 269 aaPredicted RBP9.49□□□□□ -0.89
SLIRP-205ENST00000556310 GTF2A1P52655 376 aaPredicted RBP9.49□□□□□ -0.89
SLIRP-205ENST00000556310 CAPZA1P52907 286 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 MTCP1P56278 107 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 UBA52P62987 128 aaKnown RBP9.49□□□□□ -0.89
SLIRP-205ENST00000556310 TAGLNQ01995 201 aaKnown RBP9.49□□□□□ -0.89
SLIRP-205ENST00000556310 ST3GAL4Q11206 333 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 RUSC1-AS1Q66K80 236 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 XAF1Q6GPH4 301 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 LAIR2Q6ISS4 152 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 METAP1DQ6UB28 335 aaPredicted RBP9.49□□□□□ -0.89
SLIRP-205ENST00000556310 VMO1Q7Z5L0 202 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 MKXQ8IYA7 352 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 FAM216AQ8WUB2 273 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 GATAD2BQ8WXI9 593 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 RGP1Q92546 391 aaPredicted RBP9.49□□□□□ -0.89
SLIRP-205ENST00000556310 GGHQ92820 318 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 LHX4Q969G2 390 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 SMIM19Q96E16 107 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 FAM234AQ9H0X4 552 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 PLCXD1Q9NUJ7 323 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 CHCHD3Q9NX63 227 aaKnown RBP9.49□□□□□ -0.89
SLIRP-205ENST00000556310 OR14J1Q9UGF5 321 aa9.49□□□□□ -0.89
SLIRP-205ENST00000556310 IGHV1-69DA0A0B4J2H0 117 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 F8VVB4 439 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 F8VWA3 439 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 SULT1B1O43704 296 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 XPNPEP2O43895 674 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 ALX3O95076 343 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 IGHV1-69P01742 117 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 AQP4P55087 323 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 ACTG1P63261 375 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 PDZK1IP1Q13113 114 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 FIP1L1Q6UN15 594 aaKnown RBP9.48□□□□□ -0.89
SLIRP-205ENST00000556310 C1orf122Q6ZSJ8 110 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 AHSA2Q719I0 299 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 SERPINA12Q8IW75 414 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 FAM185AQ8N0U4 392 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 Q8N7P7 452 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 OR5D14Q8NGL3 314 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 GPR148Q8TDV2 347 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 NRG4Q8WWG1 115 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 EMG1Q92979 244 aaKnown RBP9.48□□□□□ -0.89
SLIRP-205ENST00000556310 C1orf147Q96MC9 270 aaPredicted RBP9.48□□□□□ -0.89
SLIRP-205ENST00000556310 PRDM13Q9H4Q3 707 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 UNKLQ9H9P5 680 aaKnown RBP9.48□□□□□ -0.89
SLIRP-205ENST00000556310 SEBOXQ9HB31 216 aaPredicted RBP9.48□□□□□ -0.89
SLIRP-205ENST00000556310 BABAM2Q9NXR7 383 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 CLEC2DQ9UHP7 191 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms