RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ST3GAL6Q9Y274 331 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 ZNF835Q9Y2P0 537 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 SLC25A15Q9Y619 301 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 IQCF6A8MYZ5 107 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 SSNA1O43805 119 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 CREBL2O60519 120 aaPredicted RBP12.59□□□□□ -0.39
VPS33B-205ENST00000556096 LILRA1O75019 489 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 C1QBP02746 253 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 IFNA6P05013 189 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 CECR9P0C854 216 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 KCNJ8Q15842 424 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 PIGYQ3MUY2 71 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 C3orf36Q3SXR2 165 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 NHLRC3Q5JS37 347 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 TIMM23BQ5SRD1 257 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 SEZ6L2Q6UXD5 910 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 ZGRF1Q86YA3 2104 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 ZNF573Q86YE8 665 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 CCDC107Q8WV48 283 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 EMG1Q92979 244 aaKnown RBP12.59□□□□□ -0.39
VPS33B-205ENST00000556096 SEC22CQ9BRL7 303 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 C1QTNF6Q9BXI9 259 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 TMEM82A0PJX8 343 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 MSTNO14793 375 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 GEMIN2O14893 280 aaKnown RBP12.59□□□□□ -0.39
VPS33B-205ENST00000556096 OPRM1P35372 400 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 NKX2-5P52952 324 aaPredicted RBP12.59□□□□□ -0.39
VPS33B-205ENST00000556096 FGF12P61328 243 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 NKPD1Q17RQ9 610 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 MICBQ29980 383 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 SCGB2B2Q4G0G5 96 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 ARRDC1Q8N5I2 433 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 ZDHHC22Q8N966 263 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 MARS2Q96GW9 593 aaKnown RBP12.59□□□□□ -0.39
VPS33B-205ENST00000556096 CCDC120Q96HB5 630 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 PKIBQ9C010 78 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 PIGMQ9H3S5 423 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 EDARQ9UNE0 448 aa12.59□□□□□ -0.39
VPS33B-205ENST00000556096 MEIKINA0A087WXM9 373 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 IGHV1-18A0A0C4DH31 117 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 TPD52L2O43399 206 aaKnown RBP12.58□□□□□ -0.4
VPS33B-205ENST00000556096 PDCD6O75340 191 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 PMP2P02689 132 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 CSN2P05814 226 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 ANXA3P12429 323 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 AMY2BP19961 511 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 CA6P23280 308 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 DTYMKP23919 212 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 NPBWR2P48146 333 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 SNU13P55769 128 aaKnown RBP12.58□□□□□ -0.4
VPS33B-205ENST00000556096 TAS2R46P59540 309 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 IL24Q13007 206 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 NKAPLQ5M9Q1 402 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 GFRALQ6UXV0 394 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 C3P1Q6ZMU1 363 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 SPICQ8N5J4 248 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 ZBTB8BQ8NAP8 495 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-205ENST00000556096 OR10AD1Q8NGE0 317 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 SLAMF9Q96A28 289 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF486Q96H40 463 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-205ENST00000556096 CYYR1Q96J86 154 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 MICU1Q9BPX6 476 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 FAAP24Q9BTP7 215 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 ST6GALNAC5Q9BVH7 336 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 RTL8AQ9BWD3 113 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 BCL2L14Q9BZR8 327 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 CHST6Q9GZX3 395 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 OR51I2Q9H344 312 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 NPTNQ9Y639 398 aa12.58□□□□□ -0.4
VPS33B-205ENST00000556096 INTS1Q8N201 2190 aaKnown RBP12.57□□□□□ -0.4
VPS33B-205ENST00000556096 TRAPPC2LH3BP13 241 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 CXCL3P19876 107 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 BCL3P20749 454 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 FUT3P21217 361 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 ERP29P30040 261 aaKnown RBP12.57□□□□□ -0.4
VPS33B-205ENST00000556096 GZMKP49863 264 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 ERVS71-1P61550 626 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 PSG7Q13046 419 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 IGFBP7Q16270 282 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 FAM76BQ5HYJ3 339 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 ATPAF1Q5TC12 328 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-205ENST00000556096 OR5H2Q8NGV7 314 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 KLF14Q8TD94 323 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-205ENST00000556096 SULT4A1Q9BR01 284 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 PLK3Q9H4B4 646 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 RHOFQ9HBH0 211 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 MTCH1Q9NZJ7 389 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF69Q9UC07 566 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 AK3Q9UIJ7 227 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 ZNF222Q9UK12 451 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 IGHV2OR16-5A0A0B4J2B6 119 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 UBE2QL1A1L167 161 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 A8MXE2 369 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 B8ZZF3 427 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 H3BUI4 141 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 HAGHLQ6PII5 290 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-205ENST00000556096 OR5AP2Q8NGF4 316 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 TERB2Q8NHR7 220 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 MRGPRFQ96AM1 343 aa12.57□□□□□ -0.4
VPS33B-205ENST00000556096 CMSS1Q9BQ75 279 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms