RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 KLK11Q9UBX7 282 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 NAGKQ9UJ70 344 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 IGHV1-45A0A0A0MS14 117 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 A0A1W2PN81 502 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 AQP8O94778 261 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 PNPP00491 289 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 CHRNA7P36544 502 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 CCL8P80075 99 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF787Q6DD87 383 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 C8orf82Q6P1X6 216 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-220ENST00000555612 INO80CQ6PI98 192 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-220ENST00000555612 MSRB3Q8IXL7 192 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 TMEM251Q8N6I4 163 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 OR4C16Q8NGL9 310 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF665Q9H7R5 613 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 OR2J3O76001 311 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 FGF2P09038 288 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 CST2P09228 141 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 FCARP24071 287 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF90Q03938 601 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 CSRP2Q16527 193 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 AVPI1Q5T686 147 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 SSX7Q7RTT5 188 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 ZAR1Q86SH2 424 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 TMEM52Q8NDY8 209 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 OR13D1Q8NGV5 346 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 ZNRF4Q8WWF5 429 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 C2orf50Q96LR7 162 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 TMUB1Q9BVT8 246 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 FLRT3Q9NZU0 649 aa7.26□□□□□ -1.25
SYNE2-220ENST00000555612 COL5A3P25940 1745 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-220ENST00000555612 CST7O76096 145 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 HAND1O96004 215 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 MBP02144 154 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-220ENST00000555612 PXDC1Q5TGL8 231 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 SLC23A3Q6PIS1 610 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF574Q6ZN55 896 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-220ENST00000555612 OR2W3Q7Z3T1 314 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 LYG2Q86SG7 212 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ATG4DQ86TL0 474 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-220ENST00000555612 BTF3L4Q96K17 158 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 SIRT5Q9NXA8 310 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 SEC14L6B5MCN3 397 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 PDCD6O75340 191 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 JTBO76095 146 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 MAGEB1P43366 347 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 OR2F1Q13607 317 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF260Q3ZCT1 412 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 SLC7A5P1Q8MH63 180 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF721Q8TF20 911 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 TMED6Q8WW62 240 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 C1RLQ9NZP8 487 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 LIPGQ9Y5X9 500 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 TRAV1-2A0A0B4J238 106 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 TMEM272A0A1B0GTI8 110 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 LNP1A1A4G5 178 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ADRA2AP08913 450 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 FBP1P09467 338 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 CDK5Q00535 292 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 PHYHD1Q5SRE7 291 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 MRM1Q6IN84 353 aaKnown RBP7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ETFRF1Q6IPR1 90 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 DEGS2Q6QHC5 323 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 LRRTM1Q86UE6 522 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 NECAP1Q8NC96 275 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 LFNGQ8NES3 379 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 TERB2Q8NHR7 220 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 DYNC2LI1Q8TCX1 351 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 SLC25A22Q9H936 323 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF275Q9NSD4 429 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-220ENST00000555612 SLC35D1Q9NTN3 355 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 IL17BQ9UHF5 180 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 DTX4Q9Y2E6 619 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 KNTC1P50748 2209 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ADAMTSL1Q8N6G6 1762 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 CDC42EP2O14613 210 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 TAAR5O14804 337 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 SMAD7O15105 426 aaKnown RBP7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ZFPL1O95159 310 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 PTHLHP12272 177 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 HIST1H1DP16402 221 aaKnown RBP7.25□□□□□ -1.25
SYNE2-220ENST00000555612 CD80P33681 288 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 CNN1P51911 297 aaKnown RBP7.25□□□□□ -1.25
SYNE2-220ENST00000555612 CLDN20P56880 219 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 MESTQ5EB52 335 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ASCL5Q7RTU5 278 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 OR52L2PQ8NGH6 319 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 DYNLRB2Q8TF09 96 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 DOK5Q9P104 306 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 OR1A1Q9P1Q5 309 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 F5H697 171 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 LYZP61626 148 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 TMEM267Q0VDI3 215 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-220ENST00000555612 PLEKHA2Q9HB19 425 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 RNF24Q9Y225 148 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 LY75O60449 1722 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 UBR3Q6ZT12 1888 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 DUS4LO95620 317 aaKnown RBP7.25□□□□□ -1.25
SYNE2-220ENST00000555612 GIPP09681 153 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms