RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SLC7A5P1Q8MH63 180 aa8.63□□□□□ -1.03
SRP54-208ENST00000555557 OSR2Q8N2R0 312 aa8.63□□□□□ -1.03
SRP54-208ENST00000555557 CHST4Q8NCG5 386 aa8.63□□□□□ -1.03
SRP54-208ENST00000555557 FBXW5Q969U6 566 aa8.63□□□□□ -1.03
SRP54-208ENST00000555557 SEH1LQ96EE3 360 aa8.63□□□□□ -1.03
SRP54-208ENST00000555557 DYNLRB1Q9NP97 96 aa8.63□□□□□ -1.03
SRP54-208ENST00000555557 DIABLOQ9NR28 239 aa8.63□□□□□ -1.03
SRP54-208ENST00000555557 C1orf123Q9NWV4 160 aa8.63□□□□□ -1.03
SRP54-208ENST00000555557 ZDHHC8Q9ULC8 765 aa8.63□□□□□ -1.03
SRP54-208ENST00000555557 ST3GAL6Q9Y274 331 aa8.63□□□□□ -1.03
SRP54-208ENST00000555557 WNT9BO14905 357 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 SOD3P08294 240 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 PRKACAP17612 351 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 TMEM50BP56557 158 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 IFITM3Q01628 133 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 GPR176Q14439 515 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 PLAC9Q5JTB6 97 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 BRICD5Q6PL45 260 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 CDH24Q86UP0 819 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 SAXO1Q8IYX7 474 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 Q96M66 194 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 URM1Q9BTM9 101 aaKnown RBP8.62□□□□□ -1.03
SRP54-208ENST00000555557 TLNRD1Q9H1K6 362 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 WDR13Q9H1Z4 485 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 IL36GQ9NZH8 169 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 IL19Q9UHD0 177 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 POLDIP2Q9Y2S7 368 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 CACNA1DQ01668 2161 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 LRRK2Q5S007 2527 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 MEIOCA2RUB1 952 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 HS3ST1O14792 307 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 CD8AP01732 235 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 PGA5P0DJD9 388 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 GNB3P16520 340 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 TNFSF4P23510 183 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 CD40LGP29965 261 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 BLVRBP30043 206 aaPredicted RBP8.62□□□□□ -1.03
SRP54-208ENST00000555557 SRP9P49458 86 aaKnown RBP8.62□□□□□ -1.03
SRP54-208ENST00000555557 MZT1Q08AG7 82 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 OLFML2AQ68BL7 652 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 SP5Q6BEB4 398 aaPredicted RBP8.62□□□□□ -1.03
SRP54-208ENST00000555557 PYHIN1Q6K0P9 492 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 OR8H2Q8N162 312 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 Q8N402 240 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 FAM89BQ8N5H3 189 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 BOLLQ8N9W6 283 aaKnown RBP8.62□□□□□ -1.03
SRP54-208ENST00000555557 C19orf18Q8NEA5 215 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 OR10R2Q8NGX6 335 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 HPS1Q92902 700 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 EMG1Q92979 244 aaKnown RBP8.62□□□□□ -1.03
SRP54-208ENST00000555557 VRK1Q99986 396 aaPredicted RBP8.62□□□□□ -1.03
SRP54-208ENST00000555557 SPOCK3Q9BQ16 436 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 NRIP2Q9BQI9 281 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 TM2D1Q9BX74 207 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 UBTD1Q9HAC8 227 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 GCM1Q9NP62 436 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 ABCB10Q9NRK6 738 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 LAMP3Q9UQV4 416 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 LRBAP50851 2863 aa8.62□□□□□ -1.03
SRP54-208ENST00000555557 CLEC18AA5D8T8 446 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 TMEM235A6NFC5 223 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 LANCL1O43813 399 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 PTBP3O95758 552 aaKnown RBP8.61□□□□□ -1.03
SRP54-208ENST00000555557 CPT2P23786 658 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 COL8A1P27658 744 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 RBM11P57052 281 aaKnown RBP8.61□□□□□ -1.03
SRP54-208ENST00000555557 FGF12P61328 243 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 ERVK11-1P61568 191 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 SNRPD2P62316 118 aaKnown RBP8.61□□□□□ -1.03
SRP54-208ENST00000555557 DGCR2P98153 550 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 SCN1BQ07699 218 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 CDNFQ49AH0 187 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 NKAPLQ5M9Q1 402 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 FAM201AQ5SY85 155 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 SIGIRRQ6IA17 410 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 ELP2Q6IA86 826 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 CLEC18BQ6UXF7 455 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 FAM58AQ8N1B3 248 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 CELF2-AS1Q8N7Q2 184 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 CLEC18CQ8NCF0 446 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 Q8NFD4 153 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 LRRC29Q8WV35 223 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 ARHGAP5-AS1Q96IT6 56 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 MS4A5Q9H3V2 200 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 AUNIPQ9H7T9 357 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 PCDHB16Q9NRJ7 776 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 DECR2Q9NUI1 292 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 DCAF16Q9NXF7 216 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 KCNK7Q9Y2U2 307 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 CACNG2Q9Y698 323 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 HRNRQ86YZ3 2850 aaPredicted RBP8.61□□□□□ -1.03
SRP54-208ENST00000555557 HECTD1Q9ULT8 2610 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 PTPN13Q12923 2485 aa8.61□□□□□ -1.03
SRP54-208ENST00000555557 MEIS3P1A6NDR6 274 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 CYSRT1A8MQ03 144 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 OR7C1O76099 320 aaPredicted RBP8.6□□□□□ -1.03
SRP54-208ENST00000555557 NXPH2O95156 264 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 ZNF205O95201 554 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 TFF1P04155 84 aa8.6□□□□□ -1.03
SRP54-208ENST00000555557 FCER2P06734 321 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms