RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PRKACBP22694 351 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 DCKP27707 260 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 CAPGP40121 348 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 MTCP1P56278 107 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 MRPL28Q13084 256 aaKnown RBP16.82■□□□□ 0.28
VTI1B-205ENST00000555543 IL18R1Q13478 541 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 LAIR2Q6ISS4 152 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 CRIP3Q6Q6R5 217 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 METAP1DQ6UB28 335 aaPredicted RBP16.82■□□□□ 0.28
VTI1B-205ENST00000555543 C12orf54Q6X4T0 127 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 FAM185AQ8N0U4 392 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 OR5AK2Q8NH90 309 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 RFT1Q96AA3 541 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 SPSB1Q96BD6 273 aa16.82■□□□□ 0.28
VTI1B-205ENST00000555543 RBFOX1Q9NWB1 397 aaKnown RBP16.82■□□□□ 0.28
VTI1B-205ENST00000555543 DIMT1Q9UNQ2 313 aaKnown RBP16.82■□□□□ 0.28
VTI1B-205ENST00000555543 TRBV2A0A0J9YWF9 115 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 A0A0U1RQK1 487 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 M0R1W7 72 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 SPRY1O43609 319 aaPredicted RBP16.81■□□□□ 0.28
VTI1B-205ENST00000555543 CCDC159P0C7I6 412 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 BCL3P20749 454 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 NPBWR2P48146 333 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 COMPP49747 757 aaPredicted RBP16.81■□□□□ 0.28
VTI1B-205ENST00000555543 COL10A1Q03692 680 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 Q6YL49 198 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 LHFPL2Q6ZUX7 228 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 OR4M1Q8NGD0 313 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 TAF15Q92804 592 aaKnown RBP eCLIP16.81■□□□□ 0.28
VTI1B-205ENST00000555543 ZDHHC16Q969W1 377 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 SLC25A28Q96A46 364 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 COMMD4Q9H0A8 199 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 CLEC2DQ9UHP7 191 aa16.81■□□□□ 0.28
VTI1B-205ENST00000555543 CAB39Q9Y376 341 aaPredicted RBP16.81■□□□□ 0.28
VTI1B-205ENST00000555543 IGKV1-12A0A0C4DH73 117 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 A0A1W2PRD5 423 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 A0A1W2PRF3 423 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 A0A1W2PRM7 423 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 H0YAE9 185 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 ANGPTL7O43827 346 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 ZNF737O75373 536 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 IGKV1D-12P01611 117 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 MT-ND2P03891 347 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 TK1P04183 234 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 MELTFP08582 738 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 RPL31P62899 125 aaKnown RBP16.8■□□□□ 0.28
VTI1B-205ENST00000555543 CDK5R1Q15078 307 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 C1orf122Q6ZSJ8 110 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 C8orf59Q8N0T1 100 aaPredicted RBP16.8■□□□□ 0.28
VTI1B-205ENST00000555543 PNKDQ8N490 385 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 ASCC1Q8N9N2 400 aaKnown RBP16.8■□□□□ 0.28
VTI1B-205ENST00000555543 OR5D18Q8NGL1 313 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 RPS4Y2Q8TD47 263 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 GGHQ92820 318 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 EMG1Q92979 244 aaKnown RBP16.8■□□□□ 0.28
VTI1B-205ENST00000555543 ZCCHC4Q9H5U6 513 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 DCLRE1BQ9H816 532 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 UNKLQ9H9P5 680 aaKnown RBP16.8■□□□□ 0.28
VTI1B-205ENST00000555543 NOX4Q9NPH5 578 aa16.8■□□□□ 0.28
VTI1B-205ENST00000555543 SIRT4Q9Y6E7 314 aaPredicted RBP16.8■□□□□ 0.28
VTI1B-205ENST00000555543 IRGMA1A4Y4 181 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 K7N7A8 449 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 LALBAP00709 142 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 CALCBP10092 127 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 PDZK1IP1Q13113 114 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 TMEM200BQ69YZ2 307 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 ASPHD2Q6ICH7 369 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 HCP5Q6MZN7 132 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 MKXQ8IYA7 352 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 PARP16Q8N5Y8 322 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 FBLIM1Q8WUP2 373 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 TSEN15Q8WW01 171 aaKnown RBP16.79■□□□□ 0.28
VTI1B-205ENST00000555543 METTL8Q9H825 291 aaKnown RBP16.79■□□□□ 0.28
VTI1B-205ENST00000555543 TNFRSF19Q9NS68 423 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 DHDHQ9UQ10 334 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 EXOSC1Q9Y3B2 195 aaKnown RBP16.79■□□□□ 0.28
VTI1B-205ENST00000555543 HSPE1-MOB4S4R3N1 261 aa16.79■□□□□ 0.28
VTI1B-205ENST00000555543 TMEM82A0PJX8 343 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 XPNPEP2O43895 674 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 OCM2P0CE71 109 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 OCMP0CE72 109 aaPredicted RBP16.78■□□□□ 0.28
VTI1B-205ENST00000555543 HKR1P10072 659 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 PIPP12273 146 aaPredicted RBP16.78■□□□□ 0.28
VTI1B-205ENST00000555543 DUSP1P28562 367 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 ZNF273Q14593 569 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 CCDC58Q4VC31 144 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 AWAT1Q58HT5 328 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 RPL22L1Q6P5R6 122 aaKnown RBP16.78■□□□□ 0.28
VTI1B-205ENST00000555543 TMPRSS11AQ6ZMR5 421 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 Q8IYB0 196 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 FAM58AQ8N1B3 248 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 HAVCR2Q8TDQ0 301 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 TMEM80Q96HE8 168 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 FAM234AQ9H0X4 552 aa16.78■□□□□ 0.28
VTI1B-205ENST00000555543 NPFFO15130 113 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 SULT1B1O43704 296 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 ATP6V1G2O95670 118 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 HAND1O96004 215 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 CHRM2P08172 466 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 CCL3L1P16619 93 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms