RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	MGRN1	O60291	552 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	SHOX2	O60902	331 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	SAP30	O75446	220 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	ERLIN1	O75477	346 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	UBL3	O95164	117 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	SLC2A10	O95528	541 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	RAB36	O95755	333 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	IGHV2-5	P01817	119 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	OPN1MW	P04001	364 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	ASAH2B	P0C7U1	165 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	OR8G3P	P0DMU2	310 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	OPN1MW2	P0DN77	364 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	OPN1MW3	P0DN78	364 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	THRB	P10828	461 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	CRYBB2	P43320	205 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	GZMM	P51124	257 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	GBX2	P52951	348 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	UBA52	P62987	128 aa	Known RBP	4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	HERV-K104	P63124	156 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	FMOD	Q06828	376 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	RBBP4	Q09028	425 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZP4	Q12836	540 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	HIST3H3	Q16695	136 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	SNAI3	Q3KNW1	292 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	AGK	Q53H12	422 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	KLF17	Q5JT82	389 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	THEM4	Q5T1C6	240 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	OTP	Q5XKR4	325 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	ACSM5	Q6NUN0	579 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	C5orf46	Q6UWT4	87 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	NKAIN4	Q8IVV8	208 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	LRRC18	Q8N456	261 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	C3orf56	Q8N813	242 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	SYT14	Q8NB59	555 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	ICA1L	Q8NDH6	482 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	DEFB108B	Q8NET1	73 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	OR4D10	Q8NGI6	311 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	OR51F2	Q8NH61	342 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	AKR7L	Q8NHP1	331 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	PFN4	Q8NHR9	129 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	SYNPR	Q8TBG9	265 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	ADAMTS16	Q8TE57	1224 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZNF418	Q8TF45	676 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	CCL17	Q92583	94 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	MCHR2	Q969V1	340 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	NABP1	Q96AH0	204 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	TAMM41	Q96BW9	452 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	LRRC58	Q96CX6	371 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	SLC25A44	Q96H78	314 aa	Predicted RBP	4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZNF416	Q9BWM5	594 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	NMNAT2	Q9BZQ4	307 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZNF385D	Q9H6B1	395 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	TMEM38A	Q9H6F2	299 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	TMEM27	Q9HBJ8	222 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	ACOXL	Q9NUZ1	547 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	THUMPD1	Q9NXG2	353 aa	Known RBP	4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	CCDC167	Q9P0B6	97 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	SLC7A8	Q9UHI5	535 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	PPIAL4A	Q9Y536	164 aa		4.11	□□□□□ -1.75
PSMC6-208	ENST00000554956	IGHV1-69-2	A0A0G2JMI3	117 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	TRAPPC2L	H3BP13	241 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	SLC1A7	O00341	560 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	CCS	O14618	274 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	SYT7	O43581	403 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	CHP2	O43745	196 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	LANCL1	O43813	399 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	SNAP29	O95721	258 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	IGHV3-13	P01766	116 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	MT-ND2	P03891	347 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	KRT8	P05787	483 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	TSPAN19	P0C672	248 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	CALCB	P10092	127 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZNF32	P17041	273 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	RPL35A	P18077	110 aa	Known RBP	4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	AQP2	P41181	271 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	ERF	P50548	548 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	ZNF133	P52736	654 aa	Predicted RBP	4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	SLC18A1	P54219	525 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	UGT2B15	P54855	530 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	KLF3	P57682	345 aa	Predicted RBP	4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	MTPN	P58546	118 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	RPS23	P62266	143 aa	Known RBP	4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	CSNK2B	P67870	215 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	LCN2	P80188	198 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	PSG4	Q00888	419 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	RPL18	Q07020	188 aa	Known RBP	4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	MFGE8	Q08431	387 aa	Predicted RBP	4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	PABPC1L2A	Q5JQF8	200 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956		Q6ZR03	302 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	RFPL4B	Q6ZWI9	263 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	C5orf24	Q7Z6I8	188 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	LRRTM1	Q86UE6	522 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	SIGLECL1	Q8N7X8	197 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	SLC25A40	Q8TBP6	338 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	GEMIN6	Q8WXD5	167 aa	Known RBP	4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	C11orf40	Q8WZ69	217 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	OR2J1	Q9GZK6	312 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	MARCH7	Q9H992	704 aa		4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	CACYBP	Q9HB71	228 aa	Known RBP	4.1	□□□□□ -1.75
PSMC6-208	ENST00000554956	TMBIM4	Q9HC24	238 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms