RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 WDR25Q64LD2 544 aaPredicted RBP8.78□□□□□ -1
SHMT2-215ENST00000554656 PRSS45Q7RTY3 260 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 OR8B3Q8NGG8 313 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 OR52H1Q8NGJ2 320 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 Q8TCH9 128 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 TSEN15Q8WW01 171 aaKnown RBP8.78□□□□□ -1
SHMT2-215ENST00000554656 BORCS5Q969J3 196 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 TMEM106AQ96A25 262 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 SLC25A28Q96A46 364 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 ZNF799Q96GE5 643 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 CMTM3Q96MX0 182 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 OR8B2Q96RD0 313 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 NUDT16L1Q9BRJ7 211 aaKnown RBP8.78□□□□□ -1
SHMT2-215ENST00000554656 C6orf62Q9GZU0 229 aaPredicted RBP8.78□□□□□ -1
SHMT2-215ENST00000554656 PPIL3Q9H2H8 161 aaKnown RBP8.78□□□□□ -1
SHMT2-215ENST00000554656 PRDM13Q9H4Q3 707 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 TCF7L1Q9HCS4 588 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 TMEM100Q9NV29 134 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 ABRACLQ9P1F3 81 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 ADAM30Q9UKF2 790 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 GTF2A1LQ9UNN4 478 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 SLC22A13Q9Y226 551 aa8.78□□□□□ -1
SHMT2-215ENST00000554656 A0A1B0GVI7 797 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 MEGF11A6BM72 1044 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 DHRS7CA6NNS2 312 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 F5H5K5 113 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 HOXA3O43365 443 aaPredicted RBP8.77□□□□□ -1.01
SHMT2-215ENST00000554656 SFTPBP07988 381 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 CD37P11049 281 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 CPT2P23786 658 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 PTBP1P26599 531 aaKnown RBP eCLIP8.77□□□□□ -1.01
SHMT2-215ENST00000554656 PRKXP51817 358 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 ZNF121P58317 390 aaPredicted RBP8.77□□□□□ -1.01
SHMT2-215ENST00000554656 SRSF4Q08170 494 aaKnown RBP8.77□□□□□ -1.01
SHMT2-215ENST00000554656 SNAI3Q3KNW1 292 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 FAM27D1Q5T7N8 215 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 DDI2Q5TDH0 399 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 RUSC1-AS1Q66K80 236 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 SFXN4Q6P4A7 337 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 METAP1DQ6UB28 335 aaPredicted RBP8.77□□□□□ -1.01
SHMT2-215ENST00000554656 BTNL3Q6UXE8 466 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 TREML4Q6UXN2 200 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 DCDC5Q6ZRR9 648 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 CCDC190Q86UF4 302 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 MFSD4AQ8N468 514 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 PARP16Q8N5Y8 322 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 CELF2-AS1Q8N7Q2 184 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 PLPP7Q8NBV4 271 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 C10orf35Q96D05 121 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 UFSP2Q9NUQ7 469 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 CKLFQ9UBR5 152 aa8.77□□□□□ -1.01
SHMT2-215ENST00000554656 A0A1B0GTI1 187 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 POM121CA8CG34 1229 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 TNFRSF13BO14836 293 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-215ENST00000554656 SYT7O43581 403 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 PTBP3O95758 552 aaKnown RBP8.76□□□□□ -1.01
SHMT2-215ENST00000554656 LCATP04180 440 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 MMP9P14780 707 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 IGFBP3P17936 291 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-215ENST00000554656 CA6P23280 308 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 CAPZA1P52907 286 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 PPP5CP53041 499 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 RELBQ01201 579 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 ZNF92Q03936 586 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 CEP78Q5JTW2 689 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 SPANXN2Q5MJ10 180 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 C16orf87Q6PH81 154 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 NLRC3Q7RTR2 1065 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 C1orf87Q8N0U7 546 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 NKAIN3Q8N8D7 197 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 OR8B12Q8NGG6 310 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 OR13C3Q8NGS6 347 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 OR10AC1Q8NH08 325 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 OR2AE1Q8NHA4 323 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 WFDC12Q8WWY7 111 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 PGAM5Q96HS1 289 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 CEP19Q96LK0 163 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 TBX15Q96SF7 602 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 OR10A2Q9H208 303 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 RGCCQ9H4X1 137 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 RABL2AQ9UBK7 228 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-215ENST00000554656 CLN8Q9UBY8 286 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 RABL2BQ9UNT1 228 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 V9GY05 133 aa8.76□□□□□ -1.01
SHMT2-215ENST00000554656 FAM181BA6NEQ2 426 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 LRRC30A6NM36 301 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 ANXA2P2A6NMY6 339 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 CD300LBA8K4G0 201 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 SRRM5B3KS81 715 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 AIPO00170 330 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 P2RY10O00398 339 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 CTDSP2O14595 271 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 ENSAO43768 121 aaKnown RBP8.75□□□□□ -1.01
SHMT2-215ENST00000554656 MTRF1O75570 445 aaKnown RBP8.75□□□□□ -1.01
SHMT2-215ENST00000554656 ALX3O95076 343 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 ANXA2P07355 339 aaKnown RBP8.75□□□□□ -1.01
SHMT2-215ENST00000554656 TNFSF8P32971 234 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 CFHR2P36980 270 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 SOX2P48431 317 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 OR8G1Q15617 311 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms