RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 DHRS7CA6NNS2 312 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 CD300LBA8K4G0 201 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 ZFPL1O95159 310 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 FBP1P09467 338 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 UBCP0CG48 685 aaKnown RBP13.8□□□□□ -0.2
NEK9-204ENST00000554258 KIR2DS4P43632 304 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 GSK3AP49840 483 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 METTL11BQ5VVY1 283 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 WDR25Q64LD2 544 aaPredicted RBP13.8□□□□□ -0.2
NEK9-204ENST00000554258 OR2T2Q6IF00 324 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 ZNF367Q7RTV3 350 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 MRPL21Q7Z2W9 205 aaKnown RBP13.8□□□□□ -0.2
NEK9-204ENST00000554258 OR2Z1Q8NG97 314 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 OR14K1Q8NGZ2 314 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 SMIM19Q96E16 107 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 PGLYRP3Q96LB9 341 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 TMEM246Q9BRR3 403 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 ZNRD1Q9P1U0 126 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 V9GYS6 101 aa13.8□□□□□ -0.2
NEK9-204ENST00000554258 HUWE1Q7Z6Z7 4374 aaKnown RBP13.79□□□□□ -0.2
NEK9-204ENST00000554258 CD28P10747 220 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 ACKR3P25106 362 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 LMO1P25800 156 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 HOXD3P31249 432 aaPredicted RBP13.79□□□□□ -0.2
NEK9-204ENST00000554258 MLLT11Q13015 90 aaPredicted RBP13.79□□□□□ -0.2
NEK9-204ENST00000554258 MED22Q15528 200 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 PDZD9Q8IXQ8 264 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 RDH10Q8IZV5 341 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 OR5AK2Q8NH90 309 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 ITLN1Q8WWA0 313 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 FCGR1BQ92637 280 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 MGLLQ99685 303 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 GTF2A1LQ9UNN4 478 aa13.79□□□□□ -0.2
NEK9-204ENST00000554258 ADARB2-AS1A8MUL3 147 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 TIMM8AO60220 97 aaPredicted RBP13.78□□□□□ -0.2
NEK9-204ENST00000554258 MTRF1O75570 445 aaKnown RBP13.78□□□□□ -0.2
NEK9-204ENST00000554258 DHRS3O75911 302 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 LIPFP07098 398 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 JUNBP17275 347 aaPredicted RBP13.78□□□□□ -0.2
NEK9-204ENST00000554258 CELP19835 753 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 MAP2K3P46734 347 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 EGFEM1PQ0D2K5 195 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 ZNF676Q8N7Q3 588 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 CSNK2A3Q8NEV1 391 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 OR8G5Q8NG78 346 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 OR5R1Q8NH85 324 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 PPP1R35Q8TAP8 253 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 RGP1Q92546 391 aaPredicted RBP13.78□□□□□ -0.2
NEK9-204ENST00000554258 GHSRQ92847 366 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 OPALINQ96PE5 141 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 PDCD1LG2Q9BQ51 273 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 HHLA2Q9UM44 414 aa13.78□□□□□ -0.2
NEK9-204ENST00000554258 A0A1B0GVI7 797 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 LOC107986453A0A1B0GWG9 222 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 RBMY1BA6NDE4 496 aaKnown RBP13.77□□□□□ -0.21
NEK9-204ENST00000554258 RBMY1EA6NEQ0 496 aaKnown RBP13.77□□□□□ -0.21
NEK9-204ENST00000554258 GGT3PA6NGU5 568 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 SYT7O43581 403 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 CST4P01036 141 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 RBMY1DP0C7P1 496 aaKnown RBP13.77□□□□□ -0.21
NEK9-204ENST00000554258 SMIM18P0DKX4 95 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 CPEP16870 476 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 PRSS12P56730 875 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 RPS11P62280 158 aaKnown RBP eCLIP13.77□□□□□ -0.21
NEK9-204ENST00000554258 SYT6Q5T7P8 510 aaPredicted RBP13.77□□□□□ -0.21
NEK9-204ENST00000554258 Q6ZR03 302 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 KCTD8Q6ZWB6 473 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 ZFP41Q8N8Y5 198 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 OR56B2PQ8NGI1 322 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 OR10AC1Q8NH08 325 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 C10orf35Q96D05 121 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 RCC1LQ96I51 464 aaKnown RBP13.77□□□□□ -0.21
NEK9-204ENST00000554258 CITED2Q99967 270 aaPredicted RBP13.77□□□□□ -0.21
NEK9-204ENST00000554258 COMMD4Q9H0A8 199 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 MRPL15Q9P015 296 aaKnown RBP13.77□□□□□ -0.21
NEK9-204ENST00000554258 IL19Q9UHD0 177 aa13.77□□□□□ -0.21
NEK9-204ENST00000554258 SF3B6Q9Y3B4 125 aaKnown RBP13.77□□□□□ -0.21
NEK9-204ENST00000554258 TRBV5-5A0A0J9YX44 114 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 MAGEA13PA6NCF6 341 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 IFNL4K9M1U5 179 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 DUS4LO95620 317 aaKnown RBP13.76□□□□□ -0.21
NEK9-204ENST00000554258 RIPPLY1Q0D2K3 151 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 ODF4Q2M2E3 257 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 GFOD2Q3B7J2 385 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 ZNF404Q494X3 552 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 YIF1BQ5BJH7 314 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 TMEM42Q69YG0 159 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 Q8NFD4 153 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 DPF1Q92782 380 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 MUL1Q969V5 352 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 SIRPDQ9H106 197 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 GCM1Q9NP62 436 aa13.76□□□□□ -0.21
NEK9-204ENST00000554258 INMTO95050 263 aa13.75□□□□□ -0.21
NEK9-204ENST00000554258 CYB5R3P00387 301 aaPredicted RBP13.75□□□□□ -0.21
NEK9-204ENST00000554258 SSX1Q16384 188 aa13.75□□□□□ -0.21
NEK9-204ENST00000554258 CD276Q5ZPR3 534 aa13.75□□□□□ -0.21
NEK9-204ENST00000554258 UNQ9370/PRO34162Q6UXP9 181 aa13.75□□□□□ -0.21
NEK9-204ENST00000554258 MS4A15Q8N5U1 240 aa13.75□□□□□ -0.21
NEK9-204ENST00000554258 OR51A4Q8NGJ6 313 aa13.75□□□□□ -0.21
NEK9-204ENST00000554258 OR13G1Q8NGZ3 307 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms