RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TMEM217Q8N7C4 229 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 CYB561A3Q8NBI2 242 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 SDR9C7Q8NEX9 313 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 OR4M1Q8NGD0 313 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 OR4Q3Q8NH05 313 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 OR4K13Q8NH42 304 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 ACOT11Q8WXI4 607 aaPredicted RBP2.47□□□□□ -2.01
SLIRP-202ENST00000553981 MYDGFQ969H8 173 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 ERGIC1Q969X5 290 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF799Q96GE5 643 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 TPD52L3Q96J77 140 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 CYYR1Q96J86 154 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 C7orf34Q96L11 122 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 C7orf26Q96N11 449 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 ATF6BQ99941 703 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 HCAR1Q9BXC0 346 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 DPAGT1Q9H3H5 408 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 CENPHQ9H3R5 247 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 RANBP3Q9H6Z4 567 aaPredicted RBP2.47□□□□□ -2.01
SLIRP-202ENST00000553981 FN3KRPQ9HA64 309 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 RPRD1BQ9NQG5 326 aaKnown RBP2.47□□□□□ -2.01
SLIRP-202ENST00000553981 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.47□□□□□ -2.01
SLIRP-202ENST00000553981 ATPIF1Q9UII2 106 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF391Q9UJN7 358 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 RAB21Q9UL25 225 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 TCF19Q9Y242 345 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 KLHDC2Q9Y2U9 406 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 PCDHGB5Q9Y5G0 923 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 KIAA1109Q2LD37 5005 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 LCE6AA0A183 80 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 hCG_1807616A0A1W2PRN6 198 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 A6NIZ1 184 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 A6NLC8 198 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 C17orf98A8MV24 154 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 VGLL3A8MV65 326 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 FAM90A22PA8MWA6 464 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 EVPLLA8MZ36 301 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 FAM220BPB1ANY3 271 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 H0YHG0 523 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 M0R1W7 72 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 BHLHE40O14503 412 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 POLR3GO15318 223 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-202ENST00000553981 SIGLEC5O15389 551 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 ANGPTL7O43827 346 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 XPNPEP2O43895 674 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 GMDSO60547 372 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 NDUFB2O95178 105 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 ECDO95905 644 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-202ENST00000553981 GYPBP06028 91 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 IRF2P14316 349 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 TUBG1P23258 451 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 RGS6P49758 472 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 LUMP51884 338 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-202ENST00000553981 RAP1BP61224 184 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 RAP1AP62834 184 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 ST3GAL3Q11203 375 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 PPP1R8Q12972 351 aaKnown RBP2.46□□□□□ -2.02
SLIRP-202ENST00000553981 DIAPH2-AS1Q14236 149 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 TRAM2Q15035 370 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 ZFAND6Q6FIF0 208 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 KRT74Q7RTS7 529 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 DPY19L4Q7Z388 723 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 ZDHHC21Q8IVQ6 265 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 OR2C3Q8N628 320 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 TPRX1Q8N7U7 411 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 GJC3Q8NFK1 279 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 OR5AU1Q8NGC0 362 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 OR9Q1Q8NGQ5 310 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 OR11L1Q8NGX0 322 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 OR52J3Q8NH60 311 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 OR5R1Q8NH85 324 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 SLC26A7Q8TE54 656 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 NPRL2Q8WTW4 380 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 OR5P3Q8WZ94 311 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 H1FXQ92522 213 aaKnown RBP2.46□□□□□ -2.02
SLIRP-202ENST00000553981 RSRC1Q96IZ7 334 aaKnown RBP2.46□□□□□ -2.02
SLIRP-202ENST00000553981 NOL4LQ96MY1 436 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-202ENST00000553981 ERMAPQ96PL5 475 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-202ENST00000553981 OR8B4Q96RC9 309 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 P2RX4Q99571 388 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 PITX2Q99697 317 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 HDHD2Q9H0R4 259 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 OR52D1Q9H346 318 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 EGLN3Q9H6Z9 239 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 NIPAL2Q9H841 368 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 YY1AP1Q9H869 796 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 RNPEPL1Q9HAU8 725 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 TUBG2Q9NRH3 451 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 VNN3Q9NY84 501 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 HAO2Q9NYQ3 351 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 MRPL15Q9P015 296 aaKnown RBP2.46□□□□□ -2.02
SLIRP-202ENST00000553981 NDUFAF4Q9P032 175 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 KIF17Q9P2E2 1029 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 IL36RNQ9UBH0 155 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 GRHPRQ9UBQ7 328 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 SLC25A10Q9UBX3 287 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-202ENST00000553981 LINC00527Q9UJ94 153 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 SLC13A4Q9UKG4 626 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 HHLA2Q9UM44 414 aa2.46□□□□□ -2.02
SLIRP-202ENST00000553981 FAM96BQ9Y3D0 163 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms